Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Syce3B5KM66 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Syce3B5KM66 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Syce3B5KM66 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Syce3B5KM66 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Syce3B5KM66 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Syce3B5KM66 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.05■□□□□ 0.8
Syce3B5KM66 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Syce3B5KM66 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Syce3B5KM66 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Syce3B5KM66 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Syce3B5KM66 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Syce3B5KM66 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.05■□□□□ 0.8
Syce3B5KM66 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Syce3B5KM66 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Syce3B5KM66 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Syce3B5KM66 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Syce3B5KM66 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Syce3B5KM66 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Syce3B5KM66 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Syce3B5KM66 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Syce3B5KM66 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC20.04■□□□□ 0.8
Syce3B5KM66 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Syce3B5KM66 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.04■□□□□ 0.8
Syce3B5KM66 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Syce3B5KM66 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Syce3B5KM66 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Syce3B5KM66 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Syce3B5KM66 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.04■□□□□ 0.8
Syce3B5KM66 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Syce3B5KM66 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Syce3B5KM66 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Syce3B5KM66 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.04■□□□□ 0.8
Syce3B5KM66 Gm27454-201ENSMUST00000185090 204 ntBASIC20.04■□□□□ 0.8
Syce3B5KM66 Gm43060-201ENSMUST00000200621 289 ntBASIC20.04■□□□□ 0.8
Syce3B5KM66 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.04■□□□□ 0.8
Syce3B5KM66 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Syce3B5KM66 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Syce3B5KM66 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Syce3B5KM66 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Syce3B5KM66 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Syce3B5KM66 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Syce3B5KM66 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Syce3B5KM66 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Syce3B5KM66 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Syce3B5KM66 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Syce3B5KM66 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Syce3B5KM66 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Syce3B5KM66 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Syce3B5KM66 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Syce3B5KM66 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Syce3B5KM66 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.03■□□□□ 0.8
Syce3B5KM66 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Syce3B5KM66 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Syce3B5KM66 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC20.03■□□□□ 0.8
Syce3B5KM66 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Syce3B5KM66 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Syce3B5KM66 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.03■□□□□ 0.8
Syce3B5KM66 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Syce3B5KM66 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Syce3B5KM66 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Syce3B5KM66 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Syce3B5KM66 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Syce3B5KM66 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Syce3B5KM66 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Syce3B5KM66 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Syce3B5KM66 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Syce3B5KM66 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Syce3B5KM66 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Syce3B5KM66 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Syce3B5KM66 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Syce3B5KM66 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Syce3B5KM66 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Syce3B5KM66 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Syce3B5KM66 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
Syce3B5KM66 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Syce3B5KM66 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Syce3B5KM66 Dancr-204ENSMUST00000132389 2347 ntBASIC20.02■□□□□ 0.79
Syce3B5KM66 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Syce3B5KM66 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Syce3B5KM66 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC20.01■□□□□ 0.79
Syce3B5KM66 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Syce3B5KM66 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Syce3B5KM66 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Syce3B5KM66 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Syce3B5KM66 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Syce3B5KM66 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Syce3B5KM66 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Syce3B5KM66 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Syce3B5KM66 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Syce3B5KM66 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Syce3B5KM66 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Syce3B5KM66 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Syce3B5KM66 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Syce3B5KM66 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Syce3B5KM66 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC20.01■□□□□ 0.79
Syce3B5KM66 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Syce3B5KM66 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Syce3B5KM66 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Syce3B5KM66 Gm42918-201ENSMUST00000199249 1580 ntBASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms