Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm12887B1AVM1 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm12887B1AVM1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm12887B1AVM1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm12887B1AVM1 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm12887B1AVM1 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm12887B1AVM1 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Gm12887B1AVM1 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm12887B1AVM1 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm12887B1AVM1 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm12887B1AVM1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm12887B1AVM1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm12887B1AVM1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm12887B1AVM1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm12887B1AVM1 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm12887B1AVM1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
Gm12887B1AVM1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.19□□□□□ -0.14
Gm12887B1AVM1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm12887B1AVM1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm12887B1AVM1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.19□□□□□ -0.14
Gm12887B1AVM1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.19□□□□□ -0.14
Gm12887B1AVM1 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.19□□□□□ -0.14
Gm12887B1AVM1 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm12887B1AVM1 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm12887B1AVM1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm12887B1AVM1 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Gm12887B1AVM1 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm12887B1AVM1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm12887B1AVM1 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm12887B1AVM1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Gm12887B1AVM1 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Gm12887B1AVM1 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm12887B1AVM1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Gm12887B1AVM1 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm12887B1AVM1 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm12887B1AVM1 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Gm12887B1AVM1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm12887B1AVM1 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm12887B1AVM1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC14.18□□□□□ -0.14
Gm12887B1AVM1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm12887B1AVM1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.18□□□□□ -0.14
Gm12887B1AVM1 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.18□□□□□ -0.14
Gm12887B1AVM1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm12887B1AVM1 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.18□□□□□ -0.14
Gm12887B1AVM1 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm12887B1AVM1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.18□□□□□ -0.14
Gm12887B1AVM1 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm12887B1AVM1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm12887B1AVM1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm12887B1AVM1 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm12887B1AVM1 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm12887B1AVM1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm12887B1AVM1 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.17□□□□□ -0.14
Gm12887B1AVM1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm12887B1AVM1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm12887B1AVM1 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm12887B1AVM1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm12887B1AVM1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm12887B1AVM1 Gm22325-201ENSMUST00000158904 308 ntBASIC14.17□□□□□ -0.14
Gm12887B1AVM1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC14.17□□□□□ -0.14
Gm12887B1AVM1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm12887B1AVM1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm12887B1AVM1 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Gm12887B1AVM1 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.17□□□□□ -0.14
Gm12887B1AVM1 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm12887B1AVM1 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Gm12887B1AVM1 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.17□□□□□ -0.14
Gm12887B1AVM1 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Gm12887B1AVM1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Gm12887B1AVM1 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.17□□□□□ -0.14
Gm12887B1AVM1 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm12887B1AVM1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC14.16□□□□□ -0.14
Gm12887B1AVM1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Gm12887B1AVM1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Gm12887B1AVM1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm12887B1AVM1 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm12887B1AVM1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm12887B1AVM1 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm12887B1AVM1 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm12887B1AVM1 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm12887B1AVM1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm12887B1AVM1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Gm12887B1AVM1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Gm12887B1AVM1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
Gm12887B1AVM1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.16□□□□□ -0.14
Gm12887B1AVM1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm12887B1AVM1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm12887B1AVM1 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm12887B1AVM1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm12887B1AVM1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm12887B1AVM1 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm12887B1AVM1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm12887B1AVM1 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm12887B1AVM1 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm12887B1AVM1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm12887B1AVM1 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm12887B1AVM1 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm12887B1AVM1 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Gm12887B1AVM1 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm12887B1AVM1 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms