Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm6296-201ENSMUST00000222599 943 ntBASIC14.23□□□□□ -0.13
Chd6A3KFM7 Hsf1-207ENSMUST00000228371 2102 ntBASIC14.23□□□□□ -0.13
Chd6A3KFM7 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd6A3KFM7 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd6A3KFM7 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd6A3KFM7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chd6A3KFM7 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.23□□□□□ -0.13
Chd6A3KFM7 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.23□□□□□ -0.13
Chd6A3KFM7 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Chd6A3KFM7 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd6A3KFM7 Gm4974-201ENSMUST00000209974 875 ntBASIC14.23□□□□□ -0.13
Chd6A3KFM7 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd6A3KFM7 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd6A3KFM7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chd6A3KFM7 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd6A3KFM7 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Chd6A3KFM7 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Chd6A3KFM7 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd6A3KFM7 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chd6A3KFM7 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.22□□□□□ -0.13
Chd6A3KFM7 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd6A3KFM7 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd6A3KFM7 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Chd6A3KFM7 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd6A3KFM7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd6A3KFM7 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd6A3KFM7 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd6A3KFM7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd6A3KFM7 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd6A3KFM7 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chd6A3KFM7 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.22□□□□□ -0.13
Chd6A3KFM7 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd6A3KFM7 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chd6A3KFM7 Il3ra-202ENSMUST00000223589 738 ntBASIC14.22□□□□□ -0.13
Chd6A3KFM7 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd6A3KFM7 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd6A3KFM7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Chd6A3KFM7 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Chd6A3KFM7 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd6A3KFM7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
Chd6A3KFM7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chd6A3KFM7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd6A3KFM7 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chd6A3KFM7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC14.21□□□□□ -0.13
Chd6A3KFM7 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
Chd6A3KFM7 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chd6A3KFM7 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chd6A3KFM7 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.21□□□□□ -0.13
Chd6A3KFM7 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chd6A3KFM7 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chd6A3KFM7 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chd6A3KFM7 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Chd6A3KFM7 Gm14140-201ENSMUST00000119999 995 ntBASIC14.21□□□□□ -0.13
Chd6A3KFM7 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.21□□□□□ -0.13
Chd6A3KFM7 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Chd6A3KFM7 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.21□□□□□ -0.13
Chd6A3KFM7 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.21□□□□□ -0.13
Chd6A3KFM7 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chd6A3KFM7 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.21□□□□□ -0.13
Chd6A3KFM7 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chd6A3KFM7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chd6A3KFM7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Chd6A3KFM7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Chd6A3KFM7 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Chd6A3KFM7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chd6A3KFM7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chd6A3KFM7 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chd6A3KFM7 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chd6A3KFM7 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chd6A3KFM7 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd6A3KFM7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd6A3KFM7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd6A3KFM7 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd6A3KFM7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd6A3KFM7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chd6A3KFM7 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chd6A3KFM7 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.2□□□□□ -0.14
Chd6A3KFM7 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.2□□□□□ -0.14
Chd6A3KFM7 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.2□□□□□ -0.14
Chd6A3KFM7 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chd6A3KFM7 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chd6A3KFM7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chd6A3KFM7 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd6A3KFM7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Chd6A3KFM7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd6A3KFM7 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chd6A3KFM7 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd6A3KFM7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd6A3KFM7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Chd6A3KFM7 Gm14127-201ENSMUST00000117906 678 ntBASIC14.2□□□□□ -0.14
Chd6A3KFM7 Gm11025-201ENSMUST00000140773 466 ntBASIC14.2□□□□□ -0.14
Chd6A3KFM7 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chd6A3KFM7 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.2□□□□□ -0.14
Chd6A3KFM7 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.2□□□□□ -0.14
Chd6A3KFM7 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd6A3KFM7 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd6A3KFM7 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd6A3KFM7 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd6A3KFM7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chd6A3KFM7 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms