Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc194A0A140LIT1 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc194A0A140LIT1 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ccdc194A0A140LIT1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc194A0A140LIT1 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc194A0A140LIT1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc194A0A140LIT1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc194A0A140LIT1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc194A0A140LIT1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc194A0A140LIT1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc194A0A140LIT1 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc194A0A140LIT1 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc194A0A140LIT1 Gm15039-201ENSMUST00000118914 875 ntBASIC17.41■□□□□ 0.38
Ccdc194A0A140LIT1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Ccdc194A0A140LIT1 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ccdc194A0A140LIT1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc194A0A140LIT1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc194A0A140LIT1 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ccdc194A0A140LIT1 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc194A0A140LIT1 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc194A0A140LIT1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc194A0A140LIT1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.4■□□□□ 0.38
Ccdc194A0A140LIT1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc194A0A140LIT1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc194A0A140LIT1 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc194A0A140LIT1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc194A0A140LIT1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc194A0A140LIT1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc194A0A140LIT1 Gm13148-201ENSMUST00000118892 745 ntBASIC17.4■□□□□ 0.38
Ccdc194A0A140LIT1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc194A0A140LIT1 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Ccdc194A0A140LIT1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc194A0A140LIT1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc194A0A140LIT1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc194A0A140LIT1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc194A0A140LIT1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc194A0A140LIT1 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc194A0A140LIT1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc194A0A140LIT1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc194A0A140LIT1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc194A0A140LIT1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ccdc194A0A140LIT1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ccdc194A0A140LIT1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc194A0A140LIT1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Ccdc194A0A140LIT1 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc194A0A140LIT1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc194A0A140LIT1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc194A0A140LIT1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.38■□□□□ 0.37
Ccdc194A0A140LIT1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.38■□□□□ 0.37
Ccdc194A0A140LIT1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc194A0A140LIT1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc194A0A140LIT1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.38■□□□□ 0.37
Ccdc194A0A140LIT1 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ccdc194A0A140LIT1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc194A0A140LIT1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc194A0A140LIT1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc194A0A140LIT1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc194A0A140LIT1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc194A0A140LIT1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc194A0A140LIT1 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc194A0A140LIT1 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc194A0A140LIT1 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc194A0A140LIT1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc194A0A140LIT1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc194A0A140LIT1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Ccdc194A0A140LIT1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ccdc194A0A140LIT1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc194A0A140LIT1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc194A0A140LIT1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ccdc194A0A140LIT1 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc194A0A140LIT1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc194A0A140LIT1 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc194A0A140LIT1 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc194A0A140LIT1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ccdc194A0A140LIT1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc194A0A140LIT1 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.37■□□□□ 0.37
Ccdc194A0A140LIT1 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ccdc194A0A140LIT1 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.37■□□□□ 0.37
Ccdc194A0A140LIT1 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc194A0A140LIT1 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc194A0A140LIT1 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.37■□□□□ 0.37
Ccdc194A0A140LIT1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc194A0A140LIT1 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc194A0A140LIT1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc194A0A140LIT1 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc194A0A140LIT1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc194A0A140LIT1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc194A0A140LIT1 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc194A0A140LIT1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc194A0A140LIT1 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.36■□□□□ 0.37
Ccdc194A0A140LIT1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.36■□□□□ 0.37
Ccdc194A0A140LIT1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc194A0A140LIT1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc194A0A140LIT1 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc194A0A140LIT1 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc194A0A140LIT1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc194A0A140LIT1 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc194A0A140LIT1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc194A0A140LIT1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.36■□□□□ 0.37
Ccdc194A0A140LIT1 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms