Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhgb8A0A140LI48 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhgb8A0A140LI48 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhgb8A0A140LI48 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhgb8A0A140LI48 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhgb8A0A140LI48 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.8■□□□□ 0.12
Pcdhgb8A0A140LI48 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhgb8A0A140LI48 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhgb8A0A140LI48 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhgb8A0A140LI48 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhgb8A0A140LI48 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhgb8A0A140LI48 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhgb8A0A140LI48 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdhgb8A0A140LI48 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhgb8A0A140LI48 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhgb8A0A140LI48 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhgb8A0A140LI48 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhgb8A0A140LI48 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhgb8A0A140LI48 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhgb8A0A140LI48 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.8■□□□□ 0.12
Pcdhgb8A0A140LI48 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhgb8A0A140LI48 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhgb8A0A140LI48 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhgb8A0A140LI48 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhgb8A0A140LI48 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhgb8A0A140LI48 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhgb8A0A140LI48 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhgb8A0A140LI48 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhgb8A0A140LI48 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhgb8A0A140LI48 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.79■□□□□ 0.12
Pcdhgb8A0A140LI48 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhgb8A0A140LI48 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhgb8A0A140LI48 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhgb8A0A140LI48 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhgb8A0A140LI48 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.79■□□□□ 0.12
Pcdhgb8A0A140LI48 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Pcdhgb8A0A140LI48 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhgb8A0A140LI48 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhgb8A0A140LI48 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhgb8A0A140LI48 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhgb8A0A140LI48 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.79■□□□□ 0.12
Pcdhgb8A0A140LI48 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhgb8A0A140LI48 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhgb8A0A140LI48 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhgb8A0A140LI48 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhgb8A0A140LI48 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhgb8A0A140LI48 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhgb8A0A140LI48 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhgb8A0A140LI48 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhgb8A0A140LI48 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.78■□□□□ 0.12
Pcdhgb8A0A140LI48 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhgb8A0A140LI48 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhgb8A0A140LI48 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhgb8A0A140LI48 Gm12527-201ENSMUST00000117967 564 ntBASIC15.78■□□□□ 0.12
Pcdhgb8A0A140LI48 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Pcdhgb8A0A140LI48 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhgb8A0A140LI48 Gm20049-201ENSMUST00000219950 730 ntBASIC15.78■□□□□ 0.12
Pcdhgb8A0A140LI48 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.78■□□□□ 0.12
Pcdhgb8A0A140LI48 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhgb8A0A140LI48 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhgb8A0A140LI48 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.78■□□□□ 0.12
Pcdhgb8A0A140LI48 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhgb8A0A140LI48 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhgb8A0A140LI48 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhgb8A0A140LI48 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhgb8A0A140LI48 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhgb8A0A140LI48 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhgb8A0A140LI48 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhgb8A0A140LI48 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Pcdhgb8A0A140LI48 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.77■□□□□ 0.12
Pcdhgb8A0A140LI48 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhgb8A0A140LI48 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhgb8A0A140LI48 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhgb8A0A140LI48 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhgb8A0A140LI48 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhgb8A0A140LI48 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhgb8A0A140LI48 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.77■□□□□ 0.12
Pcdhgb8A0A140LI48 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.77■□□□□ 0.12
Pcdhgb8A0A140LI48 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.77■□□□□ 0.12
Pcdhgb8A0A140LI48 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhgb8A0A140LI48 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhgb8A0A140LI48 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhgb8A0A140LI48 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhgb8A0A140LI48 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhgb8A0A140LI48 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhgb8A0A140LI48 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhgb8A0A140LI48 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhgb8A0A140LI48 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdhgb8A0A140LI48 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhgb8A0A140LI48 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhgb8A0A140LI48 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdhgb8A0A140LI48 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.76■□□□□ 0.11
Pcdhgb8A0A140LI48 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.76■□□□□ 0.11
Pcdhgb8A0A140LI48 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.76■□□□□ 0.11
Pcdhgb8A0A140LI48 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhgb8A0A140LI48 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhgb8A0A140LI48 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhgb8A0A140LI48 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhgb8A0A140LI48 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhgb8A0A140LI48 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms