Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.34■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.34■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Mtag2-201ENSMUST00000058665 714 ntBASIC15.34■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav15d-2-dv6d-2A0A0G2JGQ7 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm13401-201ENSMUST00000117074 291 ntBASIC15.33■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.33■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.32■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.31■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.31■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.31■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.31■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC15.3■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms