Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Smad6-203ENSMUST00000179458 273 ntBASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Gm8493-201ENSMUST00000196881 489 ntBASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Gm43808-201ENSMUST00000202534 2065 ntBASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Gm37519-201ENSMUST00000191687 2210 ntBASIC12.01□□□□□ -0.49
Trav9d-4A0A0G2JG37 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 Gm38205-201ENSMUST00000192243 258 ntBASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 Appbp2os-202ENSMUST00000206972 447 ntBASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9d-4A0A0G2JG37 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-4A0A0G2JG37 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-4A0A0G2JG37 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav9d-4A0A0G2JG37 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav9d-4A0A0G2JG37 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-4A0A0G2JG37 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-4A0A0G2JG37 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-4A0A0G2JG37 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-4A0A0G2JG37 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-4A0A0G2JG37 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-4A0A0G2JG37 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-4A0A0G2JG37 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC11.99□□□□□ -0.49
Trav9d-4A0A0G2JG37 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-4A0A0G2JG37 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC11.99□□□□□ -0.49
Trav9d-4A0A0G2JG37 Gm26971-201ENSMUST00000182423 1072 ntBASIC11.99□□□□□ -0.49
Trav9d-4A0A0G2JG37 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-4A0A0G2JG37 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-4A0A0G2JG37 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-4A0A0G2JG37 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-4A0A0G2JG37 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav9d-4A0A0G2JG37 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-4A0A0G2JG37 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-4A0A0G2JG37 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-4A0A0G2JG37 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC11.99□□□□□ -0.49
Trav9d-4A0A0G2JG37 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-4A0A0G2JG37 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-4A0A0G2JG37 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-4A0A0G2JG37 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-4A0A0G2JG37 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-4A0A0G2JG37 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-4A0A0G2JG37 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9d-4A0A0G2JG37 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms