Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.42■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.42■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Gm3375-201ENSMUST00000203929 796 ntBASIC15.42■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.42■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.42■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.41■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Gm12085-201ENSMUST00000119263 940 ntBASIC15.41■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv12-1A0A0B4J1H0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.41■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.41■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv12-1A0A0B4J1H0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv12-1A0A0B4J1H0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.4■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.4■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.4■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.4■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv12-1A0A0B4J1H0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.39■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.39■□□□□ 0.05
Trbv12-1A0A0B4J1H0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.39■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.38■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv12-1A0A0B4J1H0 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv12-1A0A0B4J1H0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv12-1A0A0B4J1H0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.38■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.37■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.37■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.37■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms