Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv5A0A0B4J1G9 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv5A0A0B4J1G9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv5A0A0B4J1G9 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv5A0A0B4J1G9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv5A0A0B4J1G9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv5A0A0B4J1G9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv5A0A0B4J1G9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv5A0A0B4J1G9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv5A0A0B4J1G9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.09□□□□□ -0.15
Trbv5A0A0B4J1G9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv5A0A0B4J1G9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv5A0A0B4J1G9 Gm38205-201ENSMUST00000192243 258 ntBASIC14.09□□□□□ -0.15
Trbv5A0A0B4J1G9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv5A0A0B4J1G9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC14.09□□□□□ -0.15
Trbv5A0A0B4J1G9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv5A0A0B4J1G9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv5A0A0B4J1G9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv5A0A0B4J1G9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv5A0A0B4J1G9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv5A0A0B4J1G9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv5A0A0B4J1G9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv5A0A0B4J1G9 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.09□□□□□ -0.15
Trbv5A0A0B4J1G9 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trbv5A0A0B4J1G9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv5A0A0B4J1G9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv5A0A0B4J1G9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv5A0A0B4J1G9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trbv5A0A0B4J1G9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trbv5A0A0B4J1G9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Trbv5A0A0B4J1G9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Trbv5A0A0B4J1G9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trbv5A0A0B4J1G9 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trbv5A0A0B4J1G9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv5A0A0B4J1G9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Trbv5A0A0B4J1G9 Gm12251-201ENSMUST00000117893 792 ntBASIC14.08□□□□□ -0.16
Trbv5A0A0B4J1G9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC14.08□□□□□ -0.16
Trbv5A0A0B4J1G9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.08□□□□□ -0.16
Trbv5A0A0B4J1G9 Smad6-203ENSMUST00000179458 273 ntBASIC14.08□□□□□ -0.16
Trbv5A0A0B4J1G9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC14.08□□□□□ -0.16
Trbv5A0A0B4J1G9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv5A0A0B4J1G9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv5A0A0B4J1G9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv5A0A0B4J1G9 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Trbv5A0A0B4J1G9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.08□□□□□ -0.16
Trbv5A0A0B4J1G9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trbv5A0A0B4J1G9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.08□□□□□ -0.16
Trbv5A0A0B4J1G9 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv5A0A0B4J1G9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.08□□□□□ -0.16
Trbv5A0A0B4J1G9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv5A0A0B4J1G9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv5A0A0B4J1G9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv5A0A0B4J1G9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trbv5A0A0B4J1G9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.08□□□□□ -0.16
Trbv5A0A0B4J1G9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv5A0A0B4J1G9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trbv5A0A0B4J1G9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trbv5A0A0B4J1G9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv5A0A0B4J1G9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv5A0A0B4J1G9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv5A0A0B4J1G9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv5A0A0B4J1G9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv5A0A0B4J1G9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv5A0A0B4J1G9 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv5A0A0B4J1G9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv5A0A0B4J1G9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trbv5A0A0B4J1G9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv5A0A0B4J1G9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.07□□□□□ -0.16
Trbv5A0A0B4J1G9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trbv5A0A0B4J1G9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv5A0A0B4J1G9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv5A0A0B4J1G9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC14.07□□□□□ -0.16
Trbv5A0A0B4J1G9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC14.07□□□□□ -0.16
Trbv5A0A0B4J1G9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv5A0A0B4J1G9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv5A0A0B4J1G9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.07□□□□□ -0.16
Trbv5A0A0B4J1G9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv5A0A0B4J1G9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv5A0A0B4J1G9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv5A0A0B4J1G9 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trbv5A0A0B4J1G9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv5A0A0B4J1G9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Trbv5A0A0B4J1G9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.07□□□□□ -0.16
Trbv5A0A0B4J1G9 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv5A0A0B4J1G9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv5A0A0B4J1G9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trbv5A0A0B4J1G9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trbv5A0A0B4J1G9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv5A0A0B4J1G9 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv5A0A0B4J1G9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trbv5A0A0B4J1G9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trbv5A0A0B4J1G9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv5A0A0B4J1G9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv5A0A0B4J1G9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv5A0A0B4J1G9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Trbv5A0A0B4J1G9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC14.06□□□□□ -0.16
Trbv5A0A0B4J1G9 Gm43137-201ENSMUST00000198052 594 ntBASIC14.06□□□□□ -0.16
Trbv5A0A0B4J1G9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv5A0A0B4J1G9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv5A0A0B4J1G9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms