Protein–RNA interactions for Protein: A0A0A6YX06

Trbv21, T cell receptor beta, variable 21 (Fragment), mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv21A0A0A6YX06 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv21A0A0A6YX06 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trbv21A0A0A6YX06 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trbv21A0A0A6YX06 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Trbv21A0A0A6YX06 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trbv21A0A0A6YX06 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv21A0A0A6YX06 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv21A0A0A6YX06 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv21A0A0A6YX06 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv21A0A0A6YX06 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv21A0A0A6YX06 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv21A0A0A6YX06 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv21A0A0A6YX06 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.2■□□□□ 0.18
Trbv21A0A0A6YX06 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Trbv21A0A0A6YX06 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.2■□□□□ 0.18
Trbv21A0A0A6YX06 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv21A0A0A6YX06 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv21A0A0A6YX06 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv21A0A0A6YX06 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Trbv21A0A0A6YX06 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.19■□□□□ 0.18
Trbv21A0A0A6YX06 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv21A0A0A6YX06 Gm5643-201ENSMUST00000117081 966 ntBASIC16.19■□□□□ 0.18
Trbv21A0A0A6YX06 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv21A0A0A6YX06 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.19■□□□□ 0.18
Trbv21A0A0A6YX06 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv21A0A0A6YX06 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.19■□□□□ 0.18
Trbv21A0A0A6YX06 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv21A0A0A6YX06 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trbv21A0A0A6YX06 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv21A0A0A6YX06 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv21A0A0A6YX06 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv21A0A0A6YX06 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv21A0A0A6YX06 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv21A0A0A6YX06 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv21A0A0A6YX06 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trbv21A0A0A6YX06 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trbv21A0A0A6YX06 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.18■□□□□ 0.18
Trbv21A0A0A6YX06 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.18■□□□□ 0.18
Trbv21A0A0A6YX06 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.18■□□□□ 0.18
Trbv21A0A0A6YX06 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.18■□□□□ 0.18
Trbv21A0A0A6YX06 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trbv21A0A0A6YX06 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv21A0A0A6YX06 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv21A0A0A6YX06 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv21A0A0A6YX06 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Trbv21A0A0A6YX06 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv21A0A0A6YX06 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.18■□□□□ 0.18
Trbv21A0A0A6YX06 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv21A0A0A6YX06 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv21A0A0A6YX06 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv21A0A0A6YX06 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.18■□□□□ 0.18
Trbv21A0A0A6YX06 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv21A0A0A6YX06 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trbv21A0A0A6YX06 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv21A0A0A6YX06 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv21A0A0A6YX06 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv21A0A0A6YX06 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv21A0A0A6YX06 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv21A0A0A6YX06 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv21A0A0A6YX06 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv21A0A0A6YX06 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv21A0A0A6YX06 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv21A0A0A6YX06 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv21A0A0A6YX06 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.17■□□□□ 0.18
Trbv21A0A0A6YX06 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv21A0A0A6YX06 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Trbv21A0A0A6YX06 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.17■□□□□ 0.18
Trbv21A0A0A6YX06 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv21A0A0A6YX06 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv21A0A0A6YX06 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv21A0A0A6YX06 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.17■□□□□ 0.18
Trbv21A0A0A6YX06 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.16■□□□□ 0.18
Trbv21A0A0A6YX06 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv21A0A0A6YX06 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv21A0A0A6YX06 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv21A0A0A6YX06 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv21A0A0A6YX06 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv21A0A0A6YX06 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trbv21A0A0A6YX06 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv21A0A0A6YX06 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv21A0A0A6YX06 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.16■□□□□ 0.18
Trbv21A0A0A6YX06 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trbv21A0A0A6YX06 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
Trbv21A0A0A6YX06 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv21A0A0A6YX06 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.16■□□□□ 0.18
Trbv21A0A0A6YX06 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv21A0A0A6YX06 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.16■□□□□ 0.18
Trbv21A0A0A6YX06 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv21A0A0A6YX06 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Trbv21A0A0A6YX06 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv21A0A0A6YX06 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv21A0A0A6YX06 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv21A0A0A6YX06 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Trbv21A0A0A6YX06 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv21A0A0A6YX06 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.16■□□□□ 0.18
Trbv21A0A0A6YX06 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv21A0A0A6YX06 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.15■□□□□ 0.18
Trbv21A0A0A6YX06 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv21A0A0A6YX06 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv21A0A0A6YX06 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms