Protein–RNA interactions for Protein: A0A087WQQ0

Gm28557, Predicted gene 28557, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28557A0A087WQQ0 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm28557A0A087WQQ0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Gm28557A0A087WQQ0 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.73■□□□□ 0.11
Gm28557A0A087WQQ0 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.73■□□□□ 0.11
Gm28557A0A087WQQ0 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.73■□□□□ 0.11
Gm28557A0A087WQQ0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Gm28557A0A087WQQ0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm28557A0A087WQQ0 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.73■□□□□ 0.11
Gm28557A0A087WQQ0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm28557A0A087WQQ0 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.73■□□□□ 0.11
Gm28557A0A087WQQ0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Gm28557A0A087WQQ0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm28557A0A087WQQ0 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm28557A0A087WQQ0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm28557A0A087WQQ0 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.72■□□□□ 0.11
Gm28557A0A087WQQ0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Gm28557A0A087WQQ0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.72■□□□□ 0.11
Gm28557A0A087WQQ0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gm28557A0A087WQQ0 Gm29791-202ENSMUST00000207888 369 ntBASIC15.72■□□□□ 0.11
Gm28557A0A087WQQ0 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.72■□□□□ 0.11
Gm28557A0A087WQQ0 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Gm28557A0A087WQQ0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm28557A0A087WQQ0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm28557A0A087WQQ0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm28557A0A087WQQ0 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.72■□□□□ 0.11
Gm28557A0A087WQQ0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm28557A0A087WQQ0 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm28557A0A087WQQ0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm28557A0A087WQQ0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm28557A0A087WQQ0 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Gm28557A0A087WQQ0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Gm28557A0A087WQQ0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm28557A0A087WQQ0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm28557A0A087WQQ0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm28557A0A087WQQ0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Gm28557A0A087WQQ0 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm28557A0A087WQQ0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.71■□□□□ 0.11
Gm28557A0A087WQQ0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Gm28557A0A087WQQ0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm28557A0A087WQQ0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm28557A0A087WQQ0 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.71■□□□□ 0.11
Gm28557A0A087WQQ0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Gm28557A0A087WQQ0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Gm28557A0A087WQQ0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Gm28557A0A087WQQ0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.71■□□□□ 0.11
Gm28557A0A087WQQ0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Gm28557A0A087WQQ0 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm28557A0A087WQQ0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm28557A0A087WQQ0 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Gm28557A0A087WQQ0 Gm10493-201ENSMUST00000097270 612 ntBASIC15.71■□□□□ 0.11
Gm28557A0A087WQQ0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm28557A0A087WQQ0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm28557A0A087WQQ0 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm28557A0A087WQQ0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Gm28557A0A087WQQ0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm28557A0A087WQQ0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm28557A0A087WQQ0 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm28557A0A087WQQ0 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Gm28557A0A087WQQ0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Gm28557A0A087WQQ0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Gm28557A0A087WQQ0 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Gm28557A0A087WQQ0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Gm28557A0A087WQQ0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Gm28557A0A087WQQ0 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.71■□□□□ 0.1
Gm28557A0A087WQQ0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm28557A0A087WQQ0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm28557A0A087WQQ0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm28557A0A087WQQ0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm28557A0A087WQQ0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Gm28557A0A087WQQ0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gm28557A0A087WQQ0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm28557A0A087WQQ0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.7■□□□□ 0.1
Gm28557A0A087WQQ0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm28557A0A087WQQ0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Gm28557A0A087WQQ0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm28557A0A087WQQ0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gm28557A0A087WQQ0 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.7■□□□□ 0.1
Gm28557A0A087WQQ0 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm28557A0A087WQQ0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm28557A0A087WQQ0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm28557A0A087WQQ0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28557A0A087WQQ0 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28557A0A087WQQ0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28557A0A087WQQ0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28557A0A087WQQ0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28557A0A087WQQ0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28557A0A087WQQ0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28557A0A087WQQ0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Gm28557A0A087WQQ0 Gm10033-202ENSMUST00000211874 928 ntBASIC15.69■□□□□ 0.1
Gm28557A0A087WQQ0 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28557A0A087WQQ0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28557A0A087WQQ0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28557A0A087WQQ0 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.69■□□□□ 0.1
Gm28557A0A087WQQ0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28557A0A087WQQ0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28557A0A087WQQ0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28557A0A087WQQ0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm28557A0A087WQQ0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Gm28557A0A087WQQ0 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Gm28557A0A087WQQ0 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms