Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-3A0A075B6A4 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-3A0A075B6A4 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-3A0A075B6A4 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-3A0A075B6A4 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.31
Trav12d-3A0A075B6A4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.08□□□□□ -0.31
Trav12d-3A0A075B6A4 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-3A0A075B6A4 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-3A0A075B6A4 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-3A0A075B6A4 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-3A0A075B6A4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-3A0A075B6A4 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav12d-3A0A075B6A4 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-3A0A075B6A4 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-3A0A075B6A4 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-3A0A075B6A4 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.08□□□□□ -0.32
Trav12d-3A0A075B6A4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-3A0A075B6A4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-3A0A075B6A4 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-3A0A075B6A4 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-3A0A075B6A4 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.08□□□□□ -0.32
Trav12d-3A0A075B6A4 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-3A0A075B6A4 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-3A0A075B6A4 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-3A0A075B6A4 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-3A0A075B6A4 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-3A0A075B6A4 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-3A0A075B6A4 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Trav12d-3A0A075B6A4 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-3A0A075B6A4 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-3A0A075B6A4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-3A0A075B6A4 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-3A0A075B6A4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-3A0A075B6A4 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-3A0A075B6A4 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-3A0A075B6A4 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12d-3A0A075B6A4 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav12d-3A0A075B6A4 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-3A0A075B6A4 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-3A0A075B6A4 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-3A0A075B6A4 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-3A0A075B6A4 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav12d-3A0A075B6A4 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Trav12d-3A0A075B6A4 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav12d-3A0A075B6A4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-3A0A075B6A4 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav12d-3A0A075B6A4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC13.07□□□□□ -0.32
Trav12d-3A0A075B6A4 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-3A0A075B6A4 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-3A0A075B6A4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav12d-3A0A075B6A4 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-3A0A075B6A4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-3A0A075B6A4 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-3A0A075B6A4 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-3A0A075B6A4 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav12d-3A0A075B6A4 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav12d-3A0A075B6A4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-3A0A075B6A4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-3A0A075B6A4 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-3A0A075B6A4 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Trav12d-3A0A075B6A4 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-3A0A075B6A4 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav12d-3A0A075B6A4 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-3A0A075B6A4 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav12d-3A0A075B6A4 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-3A0A075B6A4 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav12d-3A0A075B6A4 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav12d-3A0A075B6A4 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-3A0A075B6A4 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-3A0A075B6A4 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trav12d-3A0A075B6A4 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-3A0A075B6A4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-3A0A075B6A4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-3A0A075B6A4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-3A0A075B6A4 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-3A0A075B6A4 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-3A0A075B6A4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav12d-3A0A075B6A4 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-3A0A075B6A4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
Trav12d-3A0A075B6A4 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-3A0A075B6A4 CT030146.1-201ENSMUST00000220919 217 ntBASIC13.06□□□□□ -0.32
Trav12d-3A0A075B6A4 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-3A0A075B6A4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-3A0A075B6A4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-3A0A075B6A4 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-3A0A075B6A4 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-3A0A075B6A4 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-3A0A075B6A4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-3A0A075B6A4 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-3A0A075B6A4 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-3A0A075B6A4 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-3A0A075B6A4 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-3A0A075B6A4 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-3A0A075B6A4 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-3A0A075B6A4 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-3A0A075B6A4 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav12d-3A0A075B6A4 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-3A0A075B6A4 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav12d-3A0A075B6A4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav12d-3A0A075B6A4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms