Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav16A0A075B653 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16A0A075B653 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.54□□□□□ -0.24
Trav16A0A075B653 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16A0A075B653 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav16A0A075B653 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16A0A075B653 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
Trav16A0A075B653 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16A0A075B653 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16A0A075B653 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16A0A075B653 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16A0A075B653 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16A0A075B653 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav16A0A075B653 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav16A0A075B653 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16A0A075B653 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16A0A075B653 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16A0A075B653 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16A0A075B653 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16A0A075B653 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Trav16A0A075B653 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16A0A075B653 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16A0A075B653 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16A0A075B653 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16A0A075B653 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16A0A075B653 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16A0A075B653 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16A0A075B653 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Trav16A0A075B653 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav16A0A075B653 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16A0A075B653 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC13.53□□□□□ -0.24
Trav16A0A075B653 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16A0A075B653 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Trav16A0A075B653 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16A0A075B653 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16A0A075B653 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16A0A075B653 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16A0A075B653 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav16A0A075B653 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav16A0A075B653 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav16A0A075B653 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Trav16A0A075B653 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav16A0A075B653 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav16A0A075B653 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav16A0A075B653 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav16A0A075B653 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.52□□□□□ -0.24
Trav16A0A075B653 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16A0A075B653 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16A0A075B653 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16A0A075B653 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16A0A075B653 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC13.52□□□□□ -0.25
Trav16A0A075B653 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16A0A075B653 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16A0A075B653 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16A0A075B653 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16A0A075B653 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Trav16A0A075B653 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16A0A075B653 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16A0A075B653 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav16A0A075B653 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16A0A075B653 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16A0A075B653 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trav16A0A075B653 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16A0A075B653 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16A0A075B653 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav16A0A075B653 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16A0A075B653 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav16A0A075B653 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16A0A075B653 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16A0A075B653 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16A0A075B653 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16A0A075B653 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16A0A075B653 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.51□□□□□ -0.25
Trav16A0A075B653 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Trav16A0A075B653 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC13.51□□□□□ -0.25
Trav16A0A075B653 Gm43034-201ENSMUST00000198678 1364 ntBASIC13.51□□□□□ -0.25
Trav16A0A075B653 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC13.51□□□□□ -0.25
Trav16A0A075B653 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Trav16A0A075B653 Gm21956-201ENSMUST00000179946 522 ntBASIC13.51□□□□□ -0.25
Trav16A0A075B653 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC13.51□□□□□ -0.25
Trav16A0A075B653 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16A0A075B653 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16A0A075B653 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16A0A075B653 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Trav16A0A075B653 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16A0A075B653 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16A0A075B653 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16A0A075B653 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16A0A075B653 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16A0A075B653 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16A0A075B653 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav16A0A075B653 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16A0A075B653 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav16A0A075B653 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trav16A0A075B653 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16A0A075B653 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16A0A075B653 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16A0A075B653 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16A0A075B653 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16A0A075B653 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms