Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-3A0A075B648 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-3A0A075B648 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-3A0A075B648 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav12-3A0A075B648 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-3A0A075B648 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-3A0A075B648 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-3A0A075B648 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC12.78□□□□□ -0.36
Trav12-3A0A075B648 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-3A0A075B648 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-3A0A075B648 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-3A0A075B648 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-3A0A075B648 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Trav12-3A0A075B648 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-3A0A075B648 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-3A0A075B648 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-3A0A075B648 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-3A0A075B648 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-3A0A075B648 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Trav12-3A0A075B648 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Trav12-3A0A075B648 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Trav12-3A0A075B648 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Trav12-3A0A075B648 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav12-3A0A075B648 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav12-3A0A075B648 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav12-3A0A075B648 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav12-3A0A075B648 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav12-3A0A075B648 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav12-3A0A075B648 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav12-3A0A075B648 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav12-3A0A075B648 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Trav12-3A0A075B648 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12-3A0A075B648 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav12-3A0A075B648 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12-3A0A075B648 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav12-3A0A075B648 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC12.77□□□□□ -0.37
Trav12-3A0A075B648 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav12-3A0A075B648 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12-3A0A075B648 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.77□□□□□ -0.37
Trav12-3A0A075B648 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12-3A0A075B648 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12-3A0A075B648 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.77□□□□□ -0.37
Trav12-3A0A075B648 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12-3A0A075B648 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav12-3A0A075B648 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12-3A0A075B648 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav12-3A0A075B648 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12-3A0A075B648 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12-3A0A075B648 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 Gm7860-201ENSMUST00000121190 879 ntBASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav12-3A0A075B648 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-3A0A075B648 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-3A0A075B648 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-3A0A075B648 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-3A0A075B648 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-3A0A075B648 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-3A0A075B648 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC12.75□□□□□ -0.37
Trav12-3A0A075B648 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav12-3A0A075B648 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-3A0A075B648 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-3A0A075B648 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-3A0A075B648 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-3A0A075B648 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-3A0A075B648 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-3A0A075B648 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-3A0A075B648 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-3A0A075B648 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-3A0A075B648 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms