Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9n-4A0A075B631 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9n-4A0A075B631 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9n-4A0A075B631 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav9n-4A0A075B631 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9n-4A0A075B631 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav9n-4A0A075B631 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
Trav9n-4A0A075B631 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9n-4A0A075B631 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9n-4A0A075B631 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9n-4A0A075B631 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9n-4A0A075B631 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav9n-4A0A075B631 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav9n-4A0A075B631 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav9n-4A0A075B631 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9n-4A0A075B631 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav9n-4A0A075B631 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Trav9n-4A0A075B631 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Trav9n-4A0A075B631 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC11.97□□□□□ -0.49
Trav9n-4A0A075B631 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC11.97□□□□□ -0.49
Trav9n-4A0A075B631 Gm7291-201ENSMUST00000199147 382 ntBASIC11.97□□□□□ -0.49
Trav9n-4A0A075B631 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav9n-4A0A075B631 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav9n-4A0A075B631 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9n-4A0A075B631 Idnk-204ENSMUST00000226010 1898 ntBASIC11.97□□□□□ -0.49
Trav9n-4A0A075B631 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9n-4A0A075B631 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9n-4A0A075B631 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9n-4A0A075B631 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9n-4A0A075B631 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav9n-4A0A075B631 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC11.97□□□□□ -0.49
Trav9n-4A0A075B631 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9n-4A0A075B631 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9n-4A0A075B631 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trav9n-4A0A075B631 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9n-4A0A075B631 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9n-4A0A075B631 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9n-4A0A075B631 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9n-4A0A075B631 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9n-4A0A075B631 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9n-4A0A075B631 AC140264.2-202ENSMUST00000218746 817 ntBASIC11.96□□□□□ -0.49
Trav9n-4A0A075B631 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9n-4A0A075B631 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9n-4A0A075B631 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav9n-4A0A075B631 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav9n-4A0A075B631 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Trav9n-4A0A075B631 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav9n-4A0A075B631 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav9n-4A0A075B631 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav9n-4A0A075B631 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav9n-4A0A075B631 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav9n-4A0A075B631 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav9n-4A0A075B631 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav9n-4A0A075B631 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav9n-4A0A075B631 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Trav9n-4A0A075B631 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9n-4A0A075B631 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9n-4A0A075B631 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9n-4A0A075B631 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9n-4A0A075B631 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9n-4A0A075B631 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC11.95□□□□□ -0.5
Trav9n-4A0A075B631 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9n-4A0A075B631 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9n-4A0A075B631 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9n-4A0A075B631 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9n-4A0A075B631 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Trav9n-4A0A075B631 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav9n-4A0A075B631 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Trav9n-4A0A075B631 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav9n-4A0A075B631 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav9n-4A0A075B631 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC11.95□□□□□ -0.5
Trav9n-4A0A075B631 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9n-4A0A075B631 Gm6211-202ENSMUST00000167849 925 ntBASIC11.95□□□□□ -0.5
Trav9n-4A0A075B631 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9n-4A0A075B631 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9n-4A0A075B631 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9n-4A0A075B631 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav9n-4A0A075B631 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav9n-4A0A075B631 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9n-4A0A075B631 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9n-4A0A075B631 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9n-4A0A075B631 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9n-4A0A075B631 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9n-4A0A075B631 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9n-4A0A075B631 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav9n-4A0A075B631 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav9n-4A0A075B631 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav9n-4A0A075B631 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav9n-4A0A075B631 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav9n-4A0A075B631 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trav9n-4A0A075B631 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav9n-4A0A075B631 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav9n-4A0A075B631 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav9n-4A0A075B631 Gm18284-201ENSMUST00000172604 624 ntBASIC11.94□□□□□ -0.5
Trav9n-4A0A075B631 Gm42555-201ENSMUST00000199304 1039 ntBASIC11.94□□□□□ -0.5
Trav9n-4A0A075B631 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav9n-4A0A075B631 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav9n-4A0A075B631 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav9n-4A0A075B631 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav9n-4A0A075B631 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms