Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16d-dv11A0A075B617 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16d-dv11A0A075B617 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16d-dv11A0A075B617 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav16d-dv11A0A075B617 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16d-dv11A0A075B617 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16d-dv11A0A075B617 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16d-dv11A0A075B617 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16d-dv11A0A075B617 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16d-dv11A0A075B617 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16d-dv11A0A075B617 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16d-dv11A0A075B617 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16d-dv11A0A075B617 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16d-dv11A0A075B617 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16d-dv11A0A075B617 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16d-dv11A0A075B617 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16d-dv11A0A075B617 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav16d-dv11A0A075B617 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16d-dv11A0A075B617 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav16d-dv11A0A075B617 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16d-dv11A0A075B617 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC12.87□□□□□ -0.35
Trav16d-dv11A0A075B617 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16d-dv11A0A075B617 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16d-dv11A0A075B617 Gm5812-201ENSMUST00000061073 957 ntBASIC12.87□□□□□ -0.35
Trav16d-dv11A0A075B617 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16d-dv11A0A075B617 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16d-dv11A0A075B617 Gm38345-201ENSMUST00000192635 1748 ntBASIC12.87□□□□□ -0.35
Trav16d-dv11A0A075B617 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16d-dv11A0A075B617 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav16d-dv11A0A075B617 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16d-dv11A0A075B617 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav16d-dv11A0A075B617 Idnk-204ENSMUST00000226010 1898 ntBASIC12.87□□□□□ -0.35
Trav16d-dv11A0A075B617 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16d-dv11A0A075B617 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16d-dv11A0A075B617 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16d-dv11A0A075B617 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav16d-dv11A0A075B617 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav16d-dv11A0A075B617 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav16d-dv11A0A075B617 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16d-dv11A0A075B617 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav16d-dv11A0A075B617 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav16d-dv11A0A075B617 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC12.86□□□□□ -0.35
Trav16d-dv11A0A075B617 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC12.86□□□□□ -0.35
Trav16d-dv11A0A075B617 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16d-dv11A0A075B617 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trav16d-dv11A0A075B617 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16d-dv11A0A075B617 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16d-dv11A0A075B617 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav16d-dv11A0A075B617 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16d-dv11A0A075B617 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav16d-dv11A0A075B617 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16d-dv11A0A075B617 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav16d-dv11A0A075B617 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16d-dv11A0A075B617 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16d-dv11A0A075B617 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16d-dv11A0A075B617 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16d-dv11A0A075B617 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16d-dv11A0A075B617 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16d-dv11A0A075B617 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.85□□□□□ -0.35
Trav16d-dv11A0A075B617 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16d-dv11A0A075B617 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16d-dv11A0A075B617 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16d-dv11A0A075B617 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav16d-dv11A0A075B617 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16d-dv11A0A075B617 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16d-dv11A0A075B617 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16d-dv11A0A075B617 Gm37563-201ENSMUST00000192580 1513 ntBASIC12.85□□□□□ -0.35
Trav16d-dv11A0A075B617 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16d-dv11A0A075B617 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16d-dv11A0A075B617 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16d-dv11A0A075B617 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav16d-dv11A0A075B617 Gm26971-201ENSMUST00000182423 1072 ntBASIC12.85□□□□□ -0.35
Trav16d-dv11A0A075B617 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16d-dv11A0A075B617 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16d-dv11A0A075B617 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16d-dv11A0A075B617 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16d-dv11A0A075B617 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16d-dv11A0A075B617 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16d-dv11A0A075B617 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trav16d-dv11A0A075B617 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16d-dv11A0A075B617 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav16d-dv11A0A075B617 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16d-dv11A0A075B617 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16d-dv11A0A075B617 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16d-dv11A0A075B617 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Trav16d-dv11A0A075B617 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16d-dv11A0A075B617 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16d-dv11A0A075B617 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16d-dv11A0A075B617 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16d-dv11A0A075B617 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16d-dv11A0A075B617 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16d-dv11A0A075B617 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16d-dv11A0A075B617 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav16d-dv11A0A075B617 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16d-dv11A0A075B617 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16d-dv11A0A075B617 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Trav16d-dv11A0A075B617 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16d-dv11A0A075B617 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16d-dv11A0A075B617 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16d-dv11A0A075B617 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms