Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.06□□□□□ -0.32
Trav6-6A0A075B603 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-6A0A075B603 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-6A0A075B603 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Trav6-6A0A075B603 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC13.05□□□□□ -0.32
Trav6-6A0A075B603 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-6A0A075B603 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-6A0A075B603 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.05□□□□□ -0.32
Trav6-6A0A075B603 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-6A0A075B603 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-6A0A075B603 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-6A0A075B603 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-6A0A075B603 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-6A0A075B603 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-6A0A075B603 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-6A0A075B603 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav6-6A0A075B603 Gm42778-201ENSMUST00000199644 553 ntBASIC13.05□□□□□ -0.32
Trav6-6A0A075B603 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.05□□□□□ -0.32
Trav6-6A0A075B603 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-6A0A075B603 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-6A0A075B603 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-6A0A075B603 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-6A0A075B603 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Trav6-6A0A075B603 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-6A0A075B603 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav6-6A0A075B603 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-6A0A075B603 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Trav6-6A0A075B603 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-6A0A075B603 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Trav6-6A0A075B603 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-6A0A075B603 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-6A0A075B603 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-6A0A075B603 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Trav6-6A0A075B603 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav6-6A0A075B603 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Trav6-6A0A075B603 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-6A0A075B603 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-6A0A075B603 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-6A0A075B603 Gm13534-201ENSMUST00000121169 513 ntBASIC13.04□□□□□ -0.32
Trav6-6A0A075B603 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav6-6A0A075B603 AC160393.1-201ENSMUST00000218378 1279 ntBASIC13.04□□□□□ -0.32
Trav6-6A0A075B603 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-6A0A075B603 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-6A0A075B603 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Trav6-6A0A075B603 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav6-6A0A075B603 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-6A0A075B603 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-6A0A075B603 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-6A0A075B603 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-6A0A075B603 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-6A0A075B603 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-6A0A075B603 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav6-6A0A075B603 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-6A0A075B603 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-6A0A075B603 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-6A0A075B603 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav6-6A0A075B603 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav6-6A0A075B603 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-6A0A075B603 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC13.03□□□□□ -0.32
Trav6-6A0A075B603 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC13.03□□□□□ -0.32
Trav6-6A0A075B603 Gm37805-201ENSMUST00000192612 1094 ntBASIC13.03□□□□□ -0.32
Trav6-6A0A075B603 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav6-6A0A075B603 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-6A0A075B603 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-6A0A075B603 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-6A0A075B603 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-6A0A075B603 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-6A0A075B603 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-6A0A075B603 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-6A0A075B603 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC13.03□□□□□ -0.32
Trav6-6A0A075B603 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-6A0A075B603 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-6A0A075B603 Gm8309-201ENSMUST00000206627 1448 ntBASIC13.03□□□□□ -0.32
Trav6-6A0A075B603 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-6A0A075B603 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-6A0A075B603 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-6A0A075B603 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-6A0A075B603 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-6A0A075B603 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-6A0A075B603 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-6A0A075B603 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-6A0A075B603 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-6A0A075B603 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-6A0A075B603 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-6A0A075B603 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-6A0A075B603 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-6A0A075B603 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-6A0A075B603 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-6A0A075B603 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-6A0A075B603 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-6A0A075B603 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-6A0A075B603 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-6A0A075B603 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav6-6A0A075B603 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav6-6A0A075B603 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-6A0A075B603 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-6A0A075B603 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-6A0A075B603 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav6-6A0A075B603 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-6A0A075B603 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms