Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Gm37717-201ENSMUST00000192647 3027 ntBASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Gm24886-201ENSMUST00000104384 123 ntBASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Gm14472-201ENSMUST00000119815 282 ntBASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Gm12340-201ENSMUST00000121617 462 ntBASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Gm23068-201ENSMUST00000158239 293 ntBASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Gm3170-201ENSMUST00000168753 850 ntBASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Gm3348-201ENSMUST00000177813 850 ntBASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Gm25412-201ENSMUST00000180258 107 ntBASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Gm21070-201ENSMUST00000182425 985 ntBASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Gm27660-201ENSMUST00000184028 208 ntBASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Zfp-ps-201ENSMUST00000185025 478 ntBASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Igkv4-75-201ENSMUST00000197204 359 ntBASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Gm44125-201ENSMUST00000203068 448 ntBASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Gm8423-201ENSMUST00000211387 607 ntBASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Gm7751-201ENSMUST00000212868 709 ntBASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 AC101984.1-201ENSMUST00000219639 402 ntBASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 AC154556.1-201ENSMUST00000224587 885 ntBASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 AC167192.2-201ENSMUST00000224794 198 ntBASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Rnf20Q5DTM8 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.36
Rnf20Q5DTM8 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Rnf20Q5DTM8 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC6.59□□□□□ -1.36
Rnf20Q5DTM8 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Rnf20Q5DTM8 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Gm42923-201ENSMUST00000198438 2896 ntBASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Gm37018-201ENSMUST00000192441 3869 ntBASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Gm24275-201ENSMUST00000116780 146 ntBASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Gm13331-201ENSMUST00000117500 448 ntBASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Gm13311-201ENSMUST00000117863 379 ntBASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Gm13503-201ENSMUST00000119017 446 ntBASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Gm13804-201ENSMUST00000119552 172 ntBASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Gm15044-201ENSMUST00000120703 598 ntBASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Gm16016-201ENSMUST00000120831 550 ntBASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Gm25459-201ENSMUST00000157953 114 ntBASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Gm23806-201ENSMUST00000175157 109 ntBASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Gm24757-201ENSMUST00000176987 371 ntBASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Gm26556-201ENSMUST00000180645 320 ntBASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Gm28418-201ENSMUST00000186179 423 ntBASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Gm28666-201ENSMUST00000186649 274 ntBASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Gm44142-201ENSMUST00000203358 311 ntBASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Gm45026-201ENSMUST00000205292 833 ntBASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Gm7786-201ENSMUST00000210494 436 ntBASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Gm19921-201ENSMUST00000210505 703 ntBASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Gm5917-201ENSMUST00000217638 721 ntBASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 AC123067.1-201ENSMUST00000217711 462 ntBASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Gm8613-201ENSMUST00000220383 1077 ntBASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 AC166358.3-201ENSMUST00000221456 181 ntBASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 AC165347.1-201ENSMUST00000224089 1025 ntBASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 AC160958.1-201ENSMUST00000224833 368 ntBASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 AC124516.1-201ENSMUST00000221845 3544 ntBASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 AL670757.1-201ENSMUST00000223668 1959 ntBASIC6.58□□□□□ -1.36
Rnf20Q5DTM8 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms