Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Chd4Q6PDQ2 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Chd4Q6PDQ2 Gm11281-201ENSMUST00000141391 576 ntBASIC5.18□□□□□ -1.58
Chd4Q6PDQ2 Gm20399-201ENSMUST00000174652 132 ntBASIC5.18□□□□□ -1.58
Chd4Q6PDQ2 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC5.18□□□□□ -1.58
Chd4Q6PDQ2 Gm34779-201ENSMUST00000210036 263 ntBASIC5.18□□□□□ -1.58
Chd4Q6PDQ2 AC171206.1-201ENSMUST00000213612 213 ntBASIC5.18□□□□□ -1.58
Chd4Q6PDQ2 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.18□□□□□ -1.58
Chd4Q6PDQ2 AC127270.2-201ENSMUST00000221337 247 ntBASIC5.18□□□□□ -1.58
Chd4Q6PDQ2 n-R5s166-201ENSMUST00000082898 121 ntBASIC5.18□□□□□ -1.58
Chd4Q6PDQ2 Mir215-201ENSMUST00000083628 112 ntBASIC5.18□□□□□ -1.58
Chd4Q6PDQ2 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Chd4Q6PDQ2 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Chd4Q6PDQ2 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Chd4Q6PDQ2 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Chd4Q6PDQ2 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Chd4Q6PDQ2 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Chd4Q6PDQ2 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Chd4Q6PDQ2 Gm14991-201ENSMUST00000119913 598 ntBASIC5.17□□□□□ -1.58
Chd4Q6PDQ2 Gm25977-201ENSMUST00000158697 85 ntBASIC5.17□□□□□ -1.58
Chd4Q6PDQ2 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Chd4Q6PDQ2 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Chd4Q6PDQ2 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC5.17□□□□□ -1.58
Chd4Q6PDQ2 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC5.17□□□□□ -1.58
Chd4Q6PDQ2 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Chd4Q6PDQ2 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Chd4Q6PDQ2 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Chd4Q6PDQ2 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Chd4Q6PDQ2 Gm42583-201ENSMUST00000202678 6700 ntBASIC5.17□□□□□ -1.58
Chd4Q6PDQ2 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Chd4Q6PDQ2 Gm11233-201ENSMUST00000122357 634 ntBASIC5.17□□□□□ -1.58
Chd4Q6PDQ2 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC5.17□□□□□ -1.58
Chd4Q6PDQ2 Gm28997-201ENSMUST00000188759 429 ntBASIC5.17□□□□□ -1.58
Chd4Q6PDQ2 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Chd4Q6PDQ2 Gm44548-201ENSMUST00000208929 192 ntBASIC5.17□□□□□ -1.58
Chd4Q6PDQ2 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC5.17□□□□□ -1.58
Chd4Q6PDQ2 CT025536.1-201ENSMUST00000226744 844 ntBASIC5.17□□□□□ -1.58
Chd4Q6PDQ2 Gm5185-201ENSMUST00000080271 619 ntBASIC5.17□□□□□ -1.58
Chd4Q6PDQ2 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.17□□□□□ -1.58
Chd4Q6PDQ2 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
Chd4Q6PDQ2 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Chd4Q6PDQ2 Gm38126-201ENSMUST00000195297 4003 ntBASIC5.16□□□□□ -1.58
Chd4Q6PDQ2 Gm37250-201ENSMUST00000194919 2388 ntBASIC5.16□□□□□ -1.58
Chd4Q6PDQ2 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Chd4Q6PDQ2 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Chd4Q6PDQ2 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.16□□□□□ -1.58
Chd4Q6PDQ2 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Chd4Q6PDQ2 Gm26276-201ENSMUST00000157099 109 ntBASIC5.16□□□□□ -1.58
Chd4Q6PDQ2 Gm25667-201ENSMUST00000157701 275 ntBASIC5.16□□□□□ -1.58
Chd4Q6PDQ2 Gm23865-201ENSMUST00000157723 97 ntBASIC5.16□□□□□ -1.58
Chd4Q6PDQ2 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC5.16□□□□□ -1.58
Chd4Q6PDQ2 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Chd4Q6PDQ2 Gm8641-201ENSMUST00000186995 826 ntBASIC5.16□□□□□ -1.58
Chd4Q6PDQ2 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC5.16□□□□□ -1.58
Chd4Q6PDQ2 Gm37239-201ENSMUST00000193510 141 ntBASIC5.16□□□□□ -1.58
Chd4Q6PDQ2 Gm43371-201ENSMUST00000202838 1031 ntBASIC5.16□□□□□ -1.58
Chd4Q6PDQ2 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC5.16□□□□□ -1.58
Chd4Q6PDQ2 Gm45420-201ENSMUST00000211243 425 ntBASIC5.16□□□□□ -1.58
Chd4Q6PDQ2 AC160865.1-201ENSMUST00000219873 151 ntBASIC5.16□□□□□ -1.58
Chd4Q6PDQ2 AC129202.3-201ENSMUST00000224413 733 ntBASIC5.16□□□□□ -1.58
Chd4Q6PDQ2 Gm23736-201ENSMUST00000082553 75 ntBASIC5.16□□□□□ -1.58
Chd4Q6PDQ2 Gm24626-201ENSMUST00000082621 161 ntBASIC5.16□□□□□ -1.58
Chd4Q6PDQ2 Gm24147-201ENSMUST00000082763 144 ntBASIC5.16□□□□□ -1.58
Chd4Q6PDQ2 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Chd4Q6PDQ2 Gm37195-201ENSMUST00000192006 3018 ntBASIC5.16□□□□□ -1.58
Chd4Q6PDQ2 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Chd4Q6PDQ2 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.16□□□□□ -1.58
Chd4Q6PDQ2 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Chd4Q6PDQ2 Gm2987-201ENSMUST00000187673 1693 ntBASIC5.16□□□□□ -1.58
Chd4Q6PDQ2 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Chd4Q6PDQ2 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Chd4Q6PDQ2 Gm44120-201ENSMUST00000203022 3023 ntBASIC5.15□□□□□ -1.58
Chd4Q6PDQ2 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Chd4Q6PDQ2 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.58
Chd4Q6PDQ2 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.58
Chd4Q6PDQ2 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.58
Chd4Q6PDQ2 Gm24127-201ENSMUST00000104110 130 ntBASIC5.15□□□□□ -1.58
Chd4Q6PDQ2 Gm4910-201ENSMUST00000119605 366 ntBASIC5.15□□□□□ -1.58
Chd4Q6PDQ2 Gm22214-201ENSMUST00000157563 172 ntBASIC5.15□□□□□ -1.58
Chd4Q6PDQ2 Gm22361-201ENSMUST00000158435 176 ntBASIC5.15□□□□□ -1.58
Chd4Q6PDQ2 Gm17155-201ENSMUST00000165969 473 ntBASIC5.15□□□□□ -1.58
Chd4Q6PDQ2 Gm37617-201ENSMUST00000194309 159 ntBASIC5.15□□□□□ -1.58
Chd4Q6PDQ2 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC5.15□□□□□ -1.58
Chd4Q6PDQ2 Gm43028-201ENSMUST00000202561 481 ntBASIC5.15□□□□□ -1.58
Chd4Q6PDQ2 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Chd4Q6PDQ2 Gm18944-201ENSMUST00000207672 643 ntBASIC5.15□□□□□ -1.58
Chd4Q6PDQ2 Gm45245-201ENSMUST00000210082 376 ntBASIC5.15□□□□□ -1.58
Chd4Q6PDQ2 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Chd4Q6PDQ2 Gm20946-201ENSMUST00000212367 461 ntBASIC5.15□□□□□ -1.58
Chd4Q6PDQ2 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Chd4Q6PDQ2 Gm22971-201ENSMUST00000083305 97 ntBASIC5.15□□□□□ -1.58
Chd4Q6PDQ2 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Chd4Q6PDQ2 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
Chd4Q6PDQ2 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Chd4Q6PDQ2 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Chd4Q6PDQ2 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Chd4Q6PDQ2 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.59
Chd4Q6PDQ2 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Chd4Q6PDQ2 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
Chd4Q6PDQ2 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms