Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Snord66-201ENSMUST00000104051 75 ntBASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Gm15021-201ENSMUST00000117832 742 ntBASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Gm11506-201ENSMUST00000122414 470 ntBASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Gm25104-201ENSMUST00000122476 163 ntBASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Gm25386-201ENSMUST00000157814 288 ntBASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Gm22158-201ENSMUST00000158411 126 ntBASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Gm25713-201ENSMUST00000158625 109 ntBASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Gm7281-201ENSMUST00000160010 543 ntBASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Gm17155-201ENSMUST00000165969 473 ntBASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Gm27976-201ENSMUST00000183635 162 ntBASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Gm8790-201ENSMUST00000194108 322 ntBASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Gm42451-201ENSMUST00000197410 244 ntBASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Gm8035-201ENSMUST00000204625 687 ntBASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Gm45200-201ENSMUST00000207434 919 ntBASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Gm31931-201ENSMUST00000219666 222 ntBASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 CT030194.2-201ENSMUST00000225752 379 ntBASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Upf3bQ3ULL6 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 Gm37718-201ENSMUST00000191655 2631 ntBASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 Gm43374-201ENSMUST00000202498 2391 ntBASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 Gm15403-201ENSMUST00000119343 1227 ntBASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 Gm7618-201ENSMUST00000121643 171 ntBASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 Klra11-ps-201ENSMUST00000122033 810 ntBASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 Gm4222-201ENSMUST00000165784 470 ntBASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 Gm29588-201ENSMUST00000185738 298 ntBASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 Gm29556-201ENSMUST00000187591 696 ntBASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 Gm43853-201ENSMUST00000197162 301 ntBASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 Olfr1309-201ENSMUST00000207885 964 ntBASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 Gm36371-201ENSMUST00000209043 1103 ntBASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 AC131720.1-201ENSMUST00000218629 2132 ntBASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 AL672194.1-201ENSMUST00000224841 603 ntBASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 AC122448.1-201ENSMUST00000226317 772 ntBASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 AC141884.1-201ENSMUST00000226327 636 ntBASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 AC154738.2-201ENSMUST00000227403 1110 ntBASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.32□□□□□ -1.72
Upf3bQ3ULL6 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 Mir551b-201ENSMUST00000102165 98 ntBASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 Gm24125-201ENSMUST00000104105 137 ntBASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 Gm15151-201ENSMUST00000117106 177 ntBASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 Gm15916-201ENSMUST00000118355 736 ntBASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 Gm24441-201ENSMUST00000157235 281 ntBASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 Gm26320-201ENSMUST00000157742 306 ntBASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 Gm25553-201ENSMUST00000158076 79 ntBASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 Gm28975-201ENSMUST00000186412 686 ntBASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 Gm5368-201ENSMUST00000189012 589 ntBASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 Gm28924-201ENSMUST00000190012 241 ntBASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 Gm17951-201ENSMUST00000198536 496 ntBASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms