Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm14563-201ENSMUST00000120571 354 ntBASIC6.11□□□□□ -1.43
Col6a1Q04857 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC6.11□□□□□ -1.43
Col6a1Q04857 Gm13409-201ENSMUST00000122072 546 ntBASIC6.11□□□□□ -1.43
Col6a1Q04857 Defa-ps12-201ENSMUST00000122353 193 ntBASIC6.11□□□□□ -1.43
Col6a1Q04857 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a1Q04857 Gm16331-201ENSMUST00000144274 498 ntBASIC6.11□□□□□ -1.43
Col6a1Q04857 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a1Q04857 Gm24875-201ENSMUST00000158888 104 ntBASIC6.11□□□□□ -1.43
Col6a1Q04857 Ear-ps7-201ENSMUST00000161287 442 ntBASIC6.11□□□□□ -1.43
Col6a1Q04857 Gm6673-201ENSMUST00000166114 700 ntBASIC6.11□□□□□ -1.43
Col6a1Q04857 Trbv10-201ENSMUST00000168322 289 ntBASIC6.11□□□□□ -1.43
Col6a1Q04857 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a1Q04857 Trbv8-201ENSMUST00000194020 285 ntBASIC6.11□□□□□ -1.43
Col6a1Q04857 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC6.11□□□□□ -1.43
Col6a1Q04857 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Col6a1Q04857 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a1Q04857 Gm44409-201ENSMUST00000198810 166 ntBASIC6.11□□□□□ -1.43
Col6a1Q04857 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Col6a1Q04857 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC6.11□□□□□ -1.43
Col6a1Q04857 Gm34224-201ENSMUST00000204606 364 ntBASIC6.11□□□□□ -1.43
Col6a1Q04857 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC6.11□□□□□ -1.43
Col6a1Q04857 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC6.11□□□□□ -1.43
Col6a1Q04857 AC132384.5-201ENSMUST00000218562 226 ntBASIC6.11□□□□□ -1.43
Col6a1Q04857 Gm46234-201ENSMUST00000218702 259 ntBASIC6.11□□□□□ -1.43
Col6a1Q04857 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a1Q04857 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Col6a1Q04857 n-R5s65-201ENSMUST00000082614 117 ntBASIC6.11□□□□□ -1.43
Col6a1Q04857 Mir325-201ENSMUST00000083491 98 ntBASIC6.11□□□□□ -1.43
Col6a1Q04857 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a1Q04857 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC6.11□□□□□ -1.43
Col6a1Q04857 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a1Q04857 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Col6a1Q04857 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a1Q04857 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a1Q04857 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a1Q04857 Gm43180-201ENSMUST00000197541 2886 ntBASIC6.11□□□□□ -1.43
Col6a1Q04857 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC6.11□□□□□ -1.43
Col6a1Q04857 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Col6a1Q04857 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a1Q04857 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
Col6a1Q04857 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Col6a1Q04857 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC6.11□□□□□ -1.43
Col6a1Q04857 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col6a1Q04857 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a1Q04857 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a1Q04857 Gm44660-201ENSMUST00000207134 2465 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a1Q04857 Gm15975-201ENSMUST00000122385 1402 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC6.1□□□□□ -1.43
Col6a1Q04857 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a1Q04857 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col6a1Q04857 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a1Q04857 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 Gm13755-201ENSMUST00000118509 305 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 Gm11774-201ENSMUST00000118601 293 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 Gm12878-201ENSMUST00000118744 332 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 Gm11975-201ENSMUST00000118772 481 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 Gm12880-201ENSMUST00000120652 494 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC6.1□□□□□ -1.43
Col6a1Q04857 Gm7855-201ENSMUST00000137737 687 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 Gm24901-201ENSMUST00000158125 110 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 Gm27541-201ENSMUST00000184078 122 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 Gm28683-201ENSMUST00000187134 615 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 Gm10193-201ENSMUST00000188288 231 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 Gm29489-201ENSMUST00000188934 324 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 Gm28840-205ENSMUST00000189320 615 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 Gm28835-203ENSMUST00000190062 615 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 Gm36998-201ENSMUST00000193205 704 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 Gm18553-201ENSMUST00000194152 634 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 Gm29736-201ENSMUST00000198189 385 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 AC174780.1-201ENSMUST00000199415 1107 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 Gm18100-201ENSMUST00000200897 452 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a1Q04857 Gm43026-201ENSMUST00000202972 325 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 Glud-ps-201ENSMUST00000206310 657 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 Gm21112-201ENSMUST00000212224 578 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 Gm7760-201ENSMUST00000212265 578 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 Gm7807-201ENSMUST00000212475 578 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC6.1□□□□□ -1.43
Col6a1Q04857 Gm46193-201ENSMUST00000219399 364 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 Gm24319-201ENSMUST00000083389 107 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a1Q04857 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
Col6a1Q04857 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a1Q04857 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 AC144733.2-201ENSMUST00000222552 2292 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 AC159896.3-201ENSMUST00000215904 3835 ntBASIC6.1□□□□□ -1.43
Col6a1Q04857 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a1Q04857 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col6a1Q04857 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Col6a1Q04857 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Col6a1Q04857 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC6.09□□□□□ -1.43
Col6a1Q04857 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a1Q04857 Gm26996-201ENSMUST00000204418 1359 ntBASIC6.09□□□□□ -1.43
Col6a1Q04857 Gm37137-201ENSMUST00000195138 2684 ntBASIC6.09□□□□□ -1.43
Col6a1Q04857 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Col6a1Q04857 Gm43282-201ENSMUST00000201848 2157 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms