Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC6.19□□□□□ -1.42
Clp1Q99LI9 Gm29148-201ENSMUST00000188140 336 ntBASIC6.19□□□□□ -1.42
Clp1Q99LI9 Gm29592-201ENSMUST00000189434 370 ntBASIC6.19□□□□□ -1.42
Clp1Q99LI9 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC6.19□□□□□ -1.42
Clp1Q99LI9 Gm29793-201ENSMUST00000202874 460 ntBASIC6.19□□□□□ -1.42
Clp1Q99LI9 Gm2011-203ENSMUST00000203750 435 ntBASIC6.19□□□□□ -1.42
Clp1Q99LI9 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC6.19□□□□□ -1.42
Clp1Q99LI9 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC6.19□□□□□ -1.42
Clp1Q99LI9 Gm19921-201ENSMUST00000210505 703 ntBASIC6.19□□□□□ -1.42
Clp1Q99LI9 Gm45312-201ENSMUST00000210566 311 ntBASIC6.19□□□□□ -1.42
Clp1Q99LI9 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
Clp1Q99LI9 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC6.19□□□□□ -1.42
Clp1Q99LI9 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Clp1Q99LI9 Gm2446-201ENSMUST00000220144 772 ntBASIC6.19□□□□□ -1.42
Clp1Q99LI9 CT010506.2-201ENSMUST00000225618 183 ntBASIC6.19□□□□□ -1.42
Clp1Q99LI9 AC126690.1-201ENSMUST00000228898 397 ntBASIC6.19□□□□□ -1.42
Clp1Q99LI9 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Clp1Q99LI9 Olfr881-201ENSMUST00000074611 948 ntBASIC6.19□□□□□ -1.42
Clp1Q99LI9 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC6.19□□□□□ -1.42
Clp1Q99LI9 AC154841.1-201ENSMUST00000227263 1479 ntBASIC6.19□□□□□ -1.42
Clp1Q99LI9 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Clp1Q99LI9 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Clp1Q99LI9 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Clp1Q99LI9 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Clp1Q99LI9 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Clp1Q99LI9 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Clp1Q99LI9 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
Clp1Q99LI9 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Clp1Q99LI9 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Clp1Q99LI9 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.18□□□□□ -1.42
Clp1Q99LI9 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Clp1Q99LI9 AC140299.2-201ENSMUST00000219546 1969 ntBASIC6.18□□□□□ -1.42
Clp1Q99LI9 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Gm14245-201ENSMUST00000118939 1843 ntBASIC6.18□□□□□ -1.42
Clp1Q99LI9 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Gm14977-201ENSMUST00000121626 812 ntBASIC6.18□□□□□ -1.42
Clp1Q99LI9 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Gm24692-201ENSMUST00000157761 146 ntBASIC6.18□□□□□ -1.42
Clp1Q99LI9 Gm3216-201ENSMUST00000166927 486 ntBASIC6.18□□□□□ -1.42
Clp1Q99LI9 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Gm22716-201ENSMUST00000177596 107 ntBASIC6.18□□□□□ -1.42
Clp1Q99LI9 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Gm27158-201ENSMUST00000183813 238 ntBASIC6.18□□□□□ -1.42
Clp1Q99LI9 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Gm28141-201ENSMUST00000186676 342 ntBASIC6.18□□□□□ -1.42
Clp1Q99LI9 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Gm28872-201ENSMUST00000191518 158 ntBASIC6.18□□□□□ -1.42
Clp1Q99LI9 Gm37111-201ENSMUST00000193250 634 ntBASIC6.18□□□□□ -1.42
Clp1Q99LI9 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Gm5917-201ENSMUST00000217638 721 ntBASIC6.18□□□□□ -1.42
Clp1Q99LI9 AL807824.1-201ENSMUST00000223151 183 ntBASIC6.18□□□□□ -1.42
Clp1Q99LI9 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Clp1Q99LI9 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Clp1Q99LI9 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Clp1Q99LI9 AC159326.1-201ENSMUST00000219989 1302 ntBASIC6.18□□□□□ -1.42
Clp1Q99LI9 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Clp1Q99LI9 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Clp1Q99LI9 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Clp1Q99LI9 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Clp1Q99LI9 AC130661.1-201ENSMUST00000218248 1680 ntBASIC6.17□□□□□ -1.42
Clp1Q99LI9 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Clp1Q99LI9 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Clp1Q99LI9 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC6.17□□□□□ -1.42
Clp1Q99LI9 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Clp1Q99LI9 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Clp1Q99LI9 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Clp1Q99LI9 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Clp1Q99LI9 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC6.17□□□□□ -1.42
Clp1Q99LI9 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Clp1Q99LI9 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Clp1Q99LI9 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Clp1Q99LI9 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Clp1Q99LI9 Gm6134-201ENSMUST00000117265 171 ntBASIC6.17□□□□□ -1.42
Clp1Q99LI9 Gm13681-201ENSMUST00000117925 210 ntBASIC6.17□□□□□ -1.42
Clp1Q99LI9 Gm12691-201ENSMUST00000120186 456 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms