Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC6.31□□□□□ -1.4
Trim56Q80VI1 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC6.31□□□□□ -1.4
Trim56Q80VI1 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC6.31□□□□□ -1.4
Trim56Q80VI1 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC6.31□□□□□ -1.4
Trim56Q80VI1 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC6.31□□□□□ -1.4
Trim56Q80VI1 Gm36998-201ENSMUST00000193205 704 ntBASIC6.31□□□□□ -1.4
Trim56Q80VI1 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC6.31□□□□□ -1.4
Trim56Q80VI1 Gm33952-201ENSMUST00000197795 408 ntBASIC6.31□□□□□ -1.4
Trim56Q80VI1 Gm7838-201ENSMUST00000203221 1189 ntBASIC6.31□□□□□ -1.4
Trim56Q80VI1 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC6.31□□□□□ -1.4
Trim56Q80VI1 Gm7039-201ENSMUST00000205138 346 ntBASIC6.31□□□□□ -1.4
Trim56Q80VI1 Gm44634-201ENSMUST00000206119 152 ntBASIC6.31□□□□□ -1.4
Trim56Q80VI1 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC6.31□□□□□ -1.4
Trim56Q80VI1 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC6.31□□□□□ -1.4
Trim56Q80VI1 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC6.31□□□□□ -1.4
Trim56Q80VI1 AC122465.3-201ENSMUST00000221644 355 ntBASIC6.31□□□□□ -1.4
Trim56Q80VI1 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC6.31□□□□□ -1.4
Trim56Q80VI1 AC102575.1-201ENSMUST00000225348 547 ntBASIC6.31□□□□□ -1.4
Trim56Q80VI1 AC154846.2-201ENSMUST00000228805 424 ntBASIC6.31□□□□□ -1.4
Trim56Q80VI1 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC6.31□□□□□ -1.4
Trim56Q80VI1 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Trim56Q80VI1 n-R5s79-201ENSMUST00000083071 120 ntBASIC6.31□□□□□ -1.4
Trim56Q80VI1 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Trim56Q80VI1 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim56Q80VI1 Gm37834-201ENSMUST00000194517 3035 ntBASIC6.31□□□□□ -1.4
Trim56Q80VI1 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim56Q80VI1 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC6.31□□□□□ -1.4
Trim56Q80VI1 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim56Q80VI1 Gm42798-201ENSMUST00000200853 3972 ntBASIC6.31□□□□□ -1.4
Trim56Q80VI1 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim56Q80VI1 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim56Q80VI1 Gm37789-201ENSMUST00000192862 2889 ntBASIC6.3□□□□□ -1.4
Trim56Q80VI1 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Trim56Q80VI1 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trim56Q80VI1 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trim56Q80VI1 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim56Q80VI1 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trim56Q80VI1 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trim56Q80VI1 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trim56Q80VI1 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim56Q80VI1 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim56Q80VI1 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trim56Q80VI1 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim56Q80VI1 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC6.3□□□□□ -1.4
Trim56Q80VI1 Gm14307-201ENSMUST00000118930 291 ntBASIC6.3□□□□□ -1.4
Trim56Q80VI1 Gm11881-201ENSMUST00000119408 572 ntBASIC6.3□□□□□ -1.4
Trim56Q80VI1 Gm13170-201ENSMUST00000119716 643 ntBASIC6.3□□□□□ -1.4
Trim56Q80VI1 Gm14534-201ENSMUST00000120045 357 ntBASIC6.3□□□□□ -1.4
Trim56Q80VI1 Gm14883-201ENSMUST00000120179 157 ntBASIC6.3□□□□□ -1.4
Trim56Q80VI1 Gm11904-201ENSMUST00000120562 248 ntBASIC6.3□□□□□ -1.4
Trim56Q80VI1 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim56Q80VI1 Gm14297-201ENSMUST00000129110 291 ntBASIC6.3□□□□□ -1.4
Trim56Q80VI1 Gm24186-201ENSMUST00000157983 127 ntBASIC6.3□□□□□ -1.4
Trim56Q80VI1 Mir3110-201ENSMUST00000175053 80 ntBASIC6.3□□□□□ -1.4
Trim56Q80VI1 Gm5139-201ENSMUST00000175943 249 ntBASIC6.3□□□□□ -1.4
Trim56Q80VI1 Gm25874-201ENSMUST00000178030 79 ntBASIC6.3□□□□□ -1.4
Trim56Q80VI1 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim56Q80VI1 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim56Q80VI1 Gm27599-201ENSMUST00000183758 174 ntBASIC6.3□□□□□ -1.4
Trim56Q80VI1 Mir7687-201ENSMUST00000184722 59 ntBASIC6.3□□□□□ -1.4
Trim56Q80VI1 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC6.3□□□□□ -1.4
Trim56Q80VI1 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trim56Q80VI1 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trim56Q80VI1 Gm5983-201ENSMUST00000197739 770 ntBASIC6.3□□□□□ -1.4
Trim56Q80VI1 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
Trim56Q80VI1 Gm29848-201ENSMUST00000203107 295 ntBASIC6.3□□□□□ -1.4
Trim56Q80VI1 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC6.3□□□□□ -1.4
Trim56Q80VI1 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC6.3□□□□□ -1.4
Trim56Q80VI1 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trim56Q80VI1 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim56Q80VI1 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim56Q80VI1 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC6.3□□□□□ -1.4
Trim56Q80VI1 AC153662.1-201ENSMUST00000222220 270 ntBASIC6.3□□□□□ -1.4
Trim56Q80VI1 AC173481.1-201ENSMUST00000223351 270 ntBASIC6.3□□□□□ -1.4
Trim56Q80VI1 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC6.3□□□□□ -1.4
Trim56Q80VI1 AC154283.1-201ENSMUST00000228417 389 ntBASIC6.3□□□□□ -1.4
Trim56Q80VI1 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trim56Q80VI1 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trim56Q80VI1 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim56Q80VI1 Gm25079-201ENSMUST00000082529 203 ntBASIC6.3□□□□□ -1.4
Trim56Q80VI1 Mir337-201ENSMUST00000083592 97 ntBASIC6.3□□□□□ -1.4
Trim56Q80VI1 Gm25187-201ENSMUST00000083906 133 ntBASIC6.3□□□□□ -1.4
Trim56Q80VI1 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC6.3□□□□□ -1.4
Trim56Q80VI1 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim56Q80VI1 Gm42992-201ENSMUST00000197043 6836 ntBASIC6.3□□□□□ -1.4
Trim56Q80VI1 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim56Q80VI1 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trim56Q80VI1 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trim56Q80VI1 Gm42658-201ENSMUST00000197199 1575 ntBASIC6.3□□□□□ -1.4
Trim56Q80VI1 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Trim56Q80VI1 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim56Q80VI1 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim56Q80VI1 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Gm37248-201ENSMUST00000193576 3174 ntBASIC6.29□□□□□ -1.4
Trim56Q80VI1 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms