Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC5.55□□□□□ -1.52
Usp4P35123 Gm43007-201ENSMUST00000197618 291 ntBASIC5.55□□□□□ -1.52
Usp4P35123 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC5.55□□□□□ -1.52
Usp4P35123 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Usp4P35123 Gm17991-201ENSMUST00000208139 297 ntBASIC5.55□□□□□ -1.52
Usp4P35123 Gm44754-201ENSMUST00000208155 400 ntBASIC5.55□□□□□ -1.52
Usp4P35123 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC5.55□□□□□ -1.52
Usp4P35123 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Usp4P35123 AC134537.2-201ENSMUST00000217770 575 ntBASIC5.55□□□□□ -1.52
Usp4P35123 Gm7530-201ENSMUST00000218466 605 ntBASIC5.55□□□□□ -1.52
Usp4P35123 CR974592.1-201ENSMUST00000220422 574 ntBASIC5.55□□□□□ -1.52
Usp4P35123 AC102291.1-201ENSMUST00000227164 529 ntBASIC5.55□□□□□ -1.52
Usp4P35123 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
Usp4P35123 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Usp4P35123 Mir188-201ENSMUST00000083464 68 ntBASIC5.55□□□□□ -1.52
Usp4P35123 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Usp4P35123 AC154323.3-201ENSMUST00000226927 1660 ntBASIC5.55□□□□□ -1.52
Usp4P35123 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Usp4P35123 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Usp4P35123 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Usp4P35123 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Usp4P35123 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Usp4P35123 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Usp4P35123 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Usp4P35123 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.54□□□□□ -1.52
Usp4P35123 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Usp4P35123 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.54□□□□□ -1.52
Usp4P35123 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Usp4P35123 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Usp4P35123 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Usp4P35123 Gm44424-201ENSMUST00000203438 1826 ntBASIC5.54□□□□□ -1.52
Usp4P35123 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Usp4P35123 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC5.54□□□□□ -1.52
Usp4P35123 Gm12268-201ENSMUST00000118398 442 ntBASIC5.54□□□□□ -1.52
Usp4P35123 Gm4989-201ENSMUST00000118711 749 ntBASIC5.54□□□□□ -1.52
Usp4P35123 Gm11313-201ENSMUST00000118779 432 ntBASIC5.54□□□□□ -1.52
Usp4P35123 Gm11890-201ENSMUST00000119585 417 ntBASIC5.54□□□□□ -1.52
Usp4P35123 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC5.54□□□□□ -1.52
Usp4P35123 Gm23228-201ENSMUST00000157296 270 ntBASIC5.54□□□□□ -1.52
Usp4P35123 Gm24734-201ENSMUST00000158860 262 ntBASIC5.54□□□□□ -1.52
Usp4P35123 Mir6341-201ENSMUST00000183490 121 ntBASIC5.54□□□□□ -1.52
Usp4P35123 Gm6717-201ENSMUST00000185549 838 ntBASIC5.54□□□□□ -1.52
Usp4P35123 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC5.54□□□□□ -1.52
Usp4P35123 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC5.54□□□□□ -1.52
Usp4P35123 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Usp4P35123 Gm35648-201ENSMUST00000202304 475 ntBASIC5.54□□□□□ -1.52
Usp4P35123 Gm8039-201ENSMUST00000204758 712 ntBASIC5.54□□□□□ -1.52
Usp4P35123 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.54□□□□□ -1.52
Usp4P35123 Gm44946-201ENSMUST00000208425 572 ntBASIC5.54□□□□□ -1.52
Usp4P35123 Gm45422-201ENSMUST00000211476 246 ntBASIC5.54□□□□□ -1.52
Usp4P35123 AC145736.1-201ENSMUST00000214661 479 ntBASIC5.54□□□□□ -1.52
Usp4P35123 AC151971.3-201ENSMUST00000214694 404 ntBASIC5.54□□□□□ -1.52
Usp4P35123 Gm19936-201ENSMUST00000216414 838 ntBASIC5.54□□□□□ -1.52
Usp4P35123 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC5.54□□□□□ -1.52
Usp4P35123 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.54□□□□□ -1.52
Usp4P35123 Gm46234-201ENSMUST00000218702 259 ntBASIC5.54□□□□□ -1.52
Usp4P35123 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC5.54□□□□□ -1.52
Usp4P35123 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC5.54□□□□□ -1.52
Usp4P35123 AC121599.1-201ENSMUST00000224276 449 ntBASIC5.54□□□□□ -1.52
Usp4P35123 Gm12582-201ENSMUST00000030555 697 ntBASIC5.54□□□□□ -1.52
Usp4P35123 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Usp4P35123 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Usp4P35123 Gm16415-201ENSMUST00000080097 489 ntBASIC5.54□□□□□ -1.52
Usp4P35123 Gm24525-201ENSMUST00000082917 151 ntBASIC5.54□□□□□ -1.52
Usp4P35123 Gm24490-201ENSMUST00000083803 98 ntBASIC5.54□□□□□ -1.52
Usp4P35123 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Usp4P35123 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC5.54□□□□□ -1.52
Usp4P35123 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.54□□□□□ -1.52
Usp4P35123 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Usp4P35123 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Usp4P35123 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.54□□□□□ -1.52
Usp4P35123 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Usp4P35123 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Usp4P35123 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.54□□□□□ -1.52
Usp4P35123 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC5.54□□□□□ -1.52
Usp4P35123 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC5.54□□□□□ -1.52
Usp4P35123 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Usp4P35123 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Usp4P35123 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Usp4P35123 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Usp4P35123 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Usp4P35123 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Usp4P35123 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.53□□□□□ -1.52
Usp4P35123 Gm11898-201ENSMUST00000117161 385 ntBASIC5.53□□□□□ -1.52
Usp4P35123 Gm12683-201ENSMUST00000117528 415 ntBASIC5.53□□□□□ -1.52
Usp4P35123 Gm13806-201ENSMUST00000117822 325 ntBASIC5.53□□□□□ -1.52
Usp4P35123 Gm14769-201ENSMUST00000118590 432 ntBASIC5.53□□□□□ -1.52
Usp4P35123 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Usp4P35123 Gm12819-201ENSMUST00000122223 629 ntBASIC5.53□□□□□ -1.52
Usp4P35123 Mir1898-201ENSMUST00000122643 83 ntBASIC5.53□□□□□ -1.52
Usp4P35123 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Usp4P35123 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC5.53□□□□□ -1.52
Usp4P35123 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC5.53□□□□□ -1.52
Usp4P35123 Gm23069-201ENSMUST00000158240 311 ntBASIC5.53□□□□□ -1.52
Usp4P35123 Gm22261-201ENSMUST00000158691 324 ntBASIC5.53□□□□□ -1.52
Usp4P35123 Gm3170-201ENSMUST00000168753 850 ntBASIC5.53□□□□□ -1.52
Usp4P35123 Gm3348-201ENSMUST00000177813 850 ntBASIC5.53□□□□□ -1.52
Usp4P35123 Gm24315-201ENSMUST00000177835 127 ntBASIC5.53□□□□□ -1.52
Usp4P35123 Gm27428-201ENSMUST00000184289 110 ntBASIC5.53□□□□□ -1.52
Usp4P35123 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms