Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Sdc1P18828 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.51□□□□□ -1.85
Sdc1P18828 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Sdc1P18828 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC3.51□□□□□ -1.85
Sdc1P18828 Gm37303-201ENSMUST00000194202 1559 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.51□□□□□ -1.85
Sdc1P18828 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Sdc1P18828 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Sdc1P18828 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Sdc1P18828 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Sdc1P18828 Gm24715-201ENSMUST00000102377 95 ntBASIC3.5□□□□□ -1.85
Sdc1P18828 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
Sdc1P18828 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Sdc1P18828 Gm24124-201ENSMUST00000104103 132 ntBASIC3.5□□□□□ -1.85
Sdc1P18828 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
Sdc1P18828 Gm12073-201ENSMUST00000117382 524 ntBASIC3.5□□□□□ -1.85
Sdc1P18828 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC3.5□□□□□ -1.85
Sdc1P18828 Gm14605-201ENSMUST00000120599 268 ntBASIC3.5□□□□□ -1.85
Sdc1P18828 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Sdc1P18828 Gm15959-201ENSMUST00000121724 368 ntBASIC3.5□□□□□ -1.85
Sdc1P18828 Gm14907-201ENSMUST00000121948 854 ntBASIC3.5□□□□□ -1.85
Sdc1P18828 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC3.5□□□□□ -1.85
Sdc1P18828 Gm14905-201ENSMUST00000122351 639 ntBASIC3.5□□□□□ -1.85
Sdc1P18828 Gm8061-201ENSMUST00000122380 350 ntBASIC3.5□□□□□ -1.85
Sdc1P18828 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC3.5□□□□□ -1.85
Sdc1P18828 Gm7855-201ENSMUST00000137737 687 ntBASIC3.5□□□□□ -1.85
Sdc1P18828 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC3.5□□□□□ -1.85
Sdc1P18828 Gm17177-201ENSMUST00000169144 483 ntBASIC3.5□□□□□ -1.85
Sdc1P18828 Gm6647-201ENSMUST00000170514 641 ntBASIC3.5□□□□□ -1.85
Sdc1P18828 Gm18354-201ENSMUST00000173515 1068 ntBASIC3.5□□□□□ -1.85
Sdc1P18828 Gm21070-201ENSMUST00000182425 985 ntBASIC3.5□□□□□ -1.85
Sdc1P18828 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Sdc1P18828 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC3.5□□□□□ -1.85
Sdc1P18828 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Sdc1P18828 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC3.5□□□□□ -1.85
Sdc1P18828 Gm9722-201ENSMUST00000194568 802 ntBASIC3.5□□□□□ -1.85
Sdc1P18828 Gm45078-201ENSMUST00000205343 546 ntBASIC3.5□□□□□ -1.85
Sdc1P18828 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Sdc1P18828 Gm4501-201ENSMUST00000207330 551 ntBASIC3.5□□□□□ -1.85
Sdc1P18828 Gm4558-201ENSMUST00000207886 521 ntBASIC3.5□□□□□ -1.85
Sdc1P18828 Gm4528-201ENSMUST00000207905 551 ntBASIC3.5□□□□□ -1.85
Sdc1P18828 Gm18258-201ENSMUST00000210413 542 ntBASIC3.5□□□□□ -1.85
Sdc1P18828 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC3.5□□□□□ -1.85
Sdc1P18828 Gm45247-201ENSMUST00000210757 309 ntBASIC3.5□□□□□ -1.85
Sdc1P18828 Gm38574-201ENSMUST00000211855 640 ntBASIC3.5□□□□□ -1.85
Sdc1P18828 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC3.5□□□□□ -1.85
Sdc1P18828 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC3.5□□□□□ -1.85
Sdc1P18828 Gm7093-201ENSMUST00000223004 581 ntBASIC3.5□□□□□ -1.85
Sdc1P18828 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC3.5□□□□□ -1.85
Sdc1P18828 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.5□□□□□ -1.85
Sdc1P18828 CT030238.1-201ENSMUST00000228393 442 ntBASIC3.5□□□□□ -1.85
Sdc1P18828 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Sdc1P18828 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Sdc1P18828 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Sdc1P18828 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Sdc1P18828 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC3.5□□□□□ -1.85
Sdc1P18828 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Sdc1P18828 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC3.5□□□□□ -1.85
Sdc1P18828 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Sdc1P18828 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
Sdc1P18828 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Sdc1P18828 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Sdc1P18828 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Sdc1P18828 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Sdc1P18828 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Sdc1P18828 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Sdc1P18828 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Sdc1P18828 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Sdc1P18828 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Sdc1P18828 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC3.49□□□□□ -1.85
Sdc1P18828 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Sdc1P18828 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Sdc1P18828 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Sdc1P18828 Gm25647-201ENSMUST00000101832 78 ntBASIC3.49□□□□□ -1.85
Sdc1P18828 Gm25823-201ENSMUST00000101995 78 ntBASIC3.49□□□□□ -1.85
Sdc1P18828 Gm23274-201ENSMUST00000104056 130 ntBASIC3.49□□□□□ -1.85
Sdc1P18828 Gm11432-201ENSMUST00000117334 231 ntBASIC3.49□□□□□ -1.85
Sdc1P18828 Gm11821-201ENSMUST00000117335 979 ntBASIC3.49□□□□□ -1.85
Sdc1P18828 Gm6373-201ENSMUST00000121026 360 ntBASIC3.49□□□□□ -1.85
Sdc1P18828 Gm15885-201ENSMUST00000122114 388 ntBASIC3.49□□□□□ -1.85
Sdc1P18828 Gm16373-201ENSMUST00000129517 303 ntBASIC3.49□□□□□ -1.85
Sdc1P18828 Gm23046-201ENSMUST00000158369 284 ntBASIC3.49□□□□□ -1.85
Sdc1P18828 Gm24343-201ENSMUST00000158708 111 ntBASIC3.49□□□□□ -1.85
Sdc1P18828 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC3.49□□□□□ -1.85
Sdc1P18828 Gm24220-201ENSMUST00000177753 79 ntBASIC3.49□□□□□ -1.85
Sdc1P18828 Gm25988-201ENSMUST00000177759 79 ntBASIC3.49□□□□□ -1.85
Sdc1P18828 Gm23471-201ENSMUST00000177886 79 ntBASIC3.49□□□□□ -1.85
Sdc1P18828 Gm26488-201ENSMUST00000178225 79 ntBASIC3.49□□□□□ -1.85
Sdc1P18828 Gm23449-201ENSMUST00000179208 79 ntBASIC3.49□□□□□ -1.85
Sdc1P18828 Gm21850-201ENSMUST00000179792 359 ntBASIC3.49□□□□□ -1.85
Sdc1P18828 Gm25221-201ENSMUST00000180051 79 ntBASIC3.49□□□□□ -1.85
Sdc1P18828 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC3.49□□□□□ -1.85
Sdc1P18828 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC3.49□□□□□ -1.85
Sdc1P18828 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC3.49□□□□□ -1.85
Sdc1P18828 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Sdc1P18828 Gm19503-201ENSMUST00000187109 241 ntBASIC3.49□□□□□ -1.85
Sdc1P18828 Gm37203-201ENSMUST00000191618 385 ntBASIC3.49□□□□□ -1.85
Sdc1P18828 Gm37857-201ENSMUST00000191784 1199 ntBASIC3.49□□□□□ -1.85
Sdc1P18828 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC3.49□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms