Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm43888-201ENSMUST00000204405 2587 ntBASIC6.08□□□□□ -1.44
Trim28Q62318 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trim28Q62318 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim28Q62318 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim28Q62318 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trim28Q62318 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Trim28Q62318 Gm15125-201ENSMUST00000116185 800 ntBASIC6.07□□□□□ -1.44
Trim28Q62318 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC6.07□□□□□ -1.44
Trim28Q62318 Gm9208-201ENSMUST00000120468 948 ntBASIC6.07□□□□□ -1.44
Trim28Q62318 Gm5391-201ENSMUST00000121155 613 ntBASIC6.07□□□□□ -1.44
Trim28Q62318 Gm12807-201ENSMUST00000121546 962 ntBASIC6.07□□□□□ -1.44
Trim28Q62318 Gm13459-201ENSMUST00000121558 646 ntBASIC6.07□□□□□ -1.44
Trim28Q62318 Gm14784-201ENSMUST00000121604 663 ntBASIC6.07□□□□□ -1.44
Trim28Q62318 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim28Q62318 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC6.07□□□□□ -1.44
Trim28Q62318 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim28Q62318 Gm5252-201ENSMUST00000189030 909 ntBASIC6.07□□□□□ -1.44
Trim28Q62318 Gm44054-201ENSMUST00000203814 372 ntBASIC6.07□□□□□ -1.44
Trim28Q62318 Gm7807-201ENSMUST00000212475 578 ntBASIC6.07□□□□□ -1.44
Trim28Q62318 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trim28Q62318 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC6.07□□□□□ -1.44
Trim28Q62318 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC6.07□□□□□ -1.44
Trim28Q62318 AC113031.3-201ENSMUST00000226552 190 ntBASIC6.07□□□□□ -1.44
Trim28Q62318 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trim28Q62318 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trim28Q62318 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trim28Q62318 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trim28Q62318 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trim28Q62318 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim28Q62318 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim28Q62318 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim28Q62318 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Trim28Q62318 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trim28Q62318 Gm7269-201ENSMUST00000210819 1373 ntBASIC6.06□□□□□ -1.44
Trim28Q62318 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trim28Q62318 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim28Q62318 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trim28Q62318 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Trim28Q62318 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Trim28Q62318 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trim28Q62318 Gm22676-201ENSMUST00000116972 129 ntBASIC6.06□□□□□ -1.44
Trim28Q62318 Gm14786-201ENSMUST00000117127 944 ntBASIC6.06□□□□□ -1.44
Trim28Q62318 Gm14624-201ENSMUST00000117746 192 ntBASIC6.06□□□□□ -1.44
Trim28Q62318 Gm12190-201ENSMUST00000120001 187 ntBASIC6.06□□□□□ -1.44
Trim28Q62318 Gm11404-201ENSMUST00000120872 494 ntBASIC6.06□□□□□ -1.44
Trim28Q62318 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC6.06□□□□□ -1.44
Trim28Q62318 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Trim28Q62318 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trim28Q62318 Gm23171-201ENSMUST00000157159 264 ntBASIC6.06□□□□□ -1.44
Trim28Q62318 Samd15-201ENSMUST00000169669 1194 ntBASIC6.06□□□□□ -1.44
Trim28Q62318 Gm22395-201ENSMUST00000177427 96 ntBASIC6.06□□□□□ -1.44
Trim28Q62318 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim28Q62318 Gm27805-201ENSMUST00000184513 79 ntBASIC6.06□□□□□ -1.44
Trim28Q62318 Gm28661-201ENSMUST00000188231 681 ntBASIC6.06□□□□□ -1.44
Trim28Q62318 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trim28Q62318 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC6.06□□□□□ -1.44
Trim28Q62318 Gm37209-201ENSMUST00000194109 1276 ntBASIC6.06□□□□□ -1.44
Trim28Q62318 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC6.06□□□□□ -1.44
Trim28Q62318 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim28Q62318 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim28Q62318 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trim28Q62318 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC6.06□□□□□ -1.44
Trim28Q62318 Gm45392-201ENSMUST00000210441 214 ntBASIC6.06□□□□□ -1.44
Trim28Q62318 Gm45247-201ENSMUST00000210757 309 ntBASIC6.06□□□□□ -1.44
Trim28Q62318 AC154296.3-201ENSMUST00000214427 712 ntBASIC6.06□□□□□ -1.44
Trim28Q62318 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC6.06□□□□□ -1.44
Trim28Q62318 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Trim28Q62318 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
Trim28Q62318 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trim28Q62318 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Trim28Q62318 Gm43011-201ENSMUST00000197897 4433 ntBASIC6.06□□□□□ -1.44
Trim28Q62318 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim28Q62318 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim28Q62318 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trim28Q62318 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Trim28Q62318 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim28Q62318 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trim28Q62318 Gm37244-201ENSMUST00000191748 1981 ntBASIC6.06□□□□□ -1.44
Trim28Q62318 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim28Q62318 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC6.05□□□□□ -1.44
Trim28Q62318 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Trim28Q62318 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim28Q62318 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trim28Q62318 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim28Q62318 Gm13477-201ENSMUST00000121620 2687 ntBASIC6.05□□□□□ -1.44
Trim28Q62318 Gm38190-201ENSMUST00000192350 4755 ntBASIC6.05□□□□□ -1.44
Trim28Q62318 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim28Q62318 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim28Q62318 Gm37726-201ENSMUST00000193246 3886 ntBASIC6.05□□□□□ -1.44
Trim28Q62318 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trim28Q62318 AC153144.1-201ENSMUST00000221759 3139 ntBASIC6.05□□□□□ -1.44
Trim28Q62318 Gm15176-201ENSMUST00000117734 135 ntBASIC6.05□□□□□ -1.44
Trim28Q62318 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim28Q62318 Gm9001-201ENSMUST00000121642 399 ntBASIC6.05□□□□□ -1.44
Trim28Q62318 Gm12819-201ENSMUST00000122223 629 ntBASIC6.05□□□□□ -1.44
Trim28Q62318 Gm15534-201ENSMUST00000137642 562 ntBASIC6.05□□□□□ -1.44
Trim28Q62318 Gm25432-201ENSMUST00000158284 66 ntBASIC6.05□□□□□ -1.44
Trim28Q62318 Gm25048-201ENSMUST00000158598 91 ntBASIC6.05□□□□□ -1.44
Trim28Q62318 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim28Q62318 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms