Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trim41Q5NCC3 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trim41Q5NCC3 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trim41Q5NCC3 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trim41Q5NCC3 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trim41Q5NCC3 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trim41Q5NCC3 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Trim41Q5NCC3 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC10.43□□□□□ -0.74
Trim41Q5NCC3 Gm14292-201ENSMUST00000118761 456 ntBASIC10.43□□□□□ -0.74
Trim41Q5NCC3 Gm8545-201ENSMUST00000120692 801 ntBASIC10.43□□□□□ -0.74
Trim41Q5NCC3 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC10.43□□□□□ -0.74
Trim41Q5NCC3 Gm20698-201ENSMUST00000175657 233 ntBASIC10.43□□□□□ -0.74
Trim41Q5NCC3 Gm27385-201ENSMUST00000184747 104 ntBASIC10.43□□□□□ -0.74
Trim41Q5NCC3 AC174780.1-201ENSMUST00000199415 1107 ntBASIC10.43□□□□□ -0.74
Trim41Q5NCC3 Gm43415-201ENSMUST00000201934 750 ntBASIC10.43□□□□□ -0.74
Trim41Q5NCC3 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC10.43□□□□□ -0.74
Trim41Q5NCC3 Gm17780-201ENSMUST00000207142 612 ntBASIC10.43□□□□□ -0.74
Trim41Q5NCC3 Gm45742-201ENSMUST00000212400 433 ntBASIC10.43□□□□□ -0.74
Trim41Q5NCC3 Gm18703-201ENSMUST00000215318 333 ntBASIC10.43□□□□□ -0.74
Trim41Q5NCC3 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Trim41Q5NCC3 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trim41Q5NCC3 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trim41Q5NCC3 Gm37967-201ENSMUST00000195634 2665 ntBASIC10.43□□□□□ -0.74
Trim41Q5NCC3 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trim41Q5NCC3 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trim41Q5NCC3 Gm44416-201ENSMUST00000204055 2066 ntBASIC10.43□□□□□ -0.74
Trim41Q5NCC3 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trim41Q5NCC3 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Trim41Q5NCC3 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC10.42□□□□□ -0.74
Trim41Q5NCC3 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trim41Q5NCC3 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Trim41Q5NCC3 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim41Q5NCC3 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trim41Q5NCC3 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trim41Q5NCC3 Gm25564-201ENSMUST00000104604 132 ntBASIC10.42□□□□□ -0.74
Trim41Q5NCC3 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC10.42□□□□□ -0.74
Trim41Q5NCC3 Gm13770-201ENSMUST00000117149 305 ntBASIC10.42□□□□□ -0.74
Trim41Q5NCC3 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC10.42□□□□□ -0.74
Trim41Q5NCC3 Gm24857-201ENSMUST00000158061 310 ntBASIC10.42□□□□□ -0.74
Trim41Q5NCC3 Mir1947-201ENSMUST00000158235 85 ntBASIC10.42□□□□□ -0.74
Trim41Q5NCC3 Gm24767-201ENSMUST00000158509 95 ntBASIC10.42□□□□□ -0.74
Trim41Q5NCC3 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trim41Q5NCC3 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Trim41Q5NCC3 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Trim41Q5NCC3 Gm28429-201ENSMUST00000188521 363 ntBASIC10.42□□□□□ -0.74
Trim41Q5NCC3 Gm43070-201ENSMUST00000196938 415 ntBASIC10.42□□□□□ -0.74
Trim41Q5NCC3 Gm32158-201ENSMUST00000200135 404 ntBASIC10.42□□□□□ -0.74
Trim41Q5NCC3 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC10.42□□□□□ -0.74
Trim41Q5NCC3 Gm4263-202ENSMUST00000221392 667 ntBASIC10.42□□□□□ -0.74
Trim41Q5NCC3 Gm23737-201ENSMUST00000082547 159 ntBASIC10.42□□□□□ -0.74
Trim41Q5NCC3 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trim41Q5NCC3 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim41Q5NCC3 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trim41Q5NCC3 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC10.42□□□□□ -0.74
Trim41Q5NCC3 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim41Q5NCC3 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim41Q5NCC3 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim41Q5NCC3 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
Trim41Q5NCC3 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trim41Q5NCC3 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim41Q5NCC3 Gm7155-201ENSMUST00000121143 1671 ntBASIC10.41□□□□□ -0.74
Trim41Q5NCC3 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trim41Q5NCC3 Gm4954-201ENSMUST00000135069 1601 ntBASIC10.41□□□□□ -0.74
Trim41Q5NCC3 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trim41Q5NCC3 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trim41Q5NCC3 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Trim41Q5NCC3 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Trim41Q5NCC3 Gm22273-201ENSMUST00000104040 132 ntBASIC10.41□□□□□ -0.74
Trim41Q5NCC3 Gm22657-201ENSMUST00000104197 132 ntBASIC10.41□□□□□ -0.74
Trim41Q5NCC3 Gm23750-201ENSMUST00000104222 132 ntBASIC10.41□□□□□ -0.74
Trim41Q5NCC3 Gm11221-201ENSMUST00000117230 597 ntBASIC10.41□□□□□ -0.74
Trim41Q5NCC3 Gm14736-201ENSMUST00000121470 336 ntBASIC10.41□□□□□ -0.74
Trim41Q5NCC3 Gm25784-201ENSMUST00000122524 81 ntBASIC10.41□□□□□ -0.74
Trim41Q5NCC3 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trim41Q5NCC3 Gm26106-201ENSMUST00000157254 228 ntBASIC10.41□□□□□ -0.74
Trim41Q5NCC3 Gm22381-201ENSMUST00000158186 107 ntBASIC10.41□□□□□ -0.74
Trim41Q5NCC3 Gm23258-201ENSMUST00000158319 106 ntBASIC10.41□□□□□ -0.74
Trim41Q5NCC3 Gm23016-201ENSMUST00000158431 62 ntBASIC10.41□□□□□ -0.74
Trim41Q5NCC3 Gm17081-201ENSMUST00000167363 478 ntBASIC10.41□□□□□ -0.74
Trim41Q5NCC3 Gm5430-201ENSMUST00000182525 915 ntBASIC10.41□□□□□ -0.74
Trim41Q5NCC3 Gm27193-201ENSMUST00000184217 586 ntBASIC10.41□□□□□ -0.74
Trim41Q5NCC3 Mir6933-201ENSMUST00000184982 81 ntBASIC10.41□□□□□ -0.74
Trim41Q5NCC3 Gm2287-202ENSMUST00000199619 1000 ntBASIC10.41□□□□□ -0.74
Trim41Q5NCC3 Gm18194-201ENSMUST00000210455 481 ntBASIC10.41□□□□□ -0.74
Trim41Q5NCC3 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trim41Q5NCC3 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Trim41Q5NCC3 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC10.41□□□□□ -0.74
Trim41Q5NCC3 AC129085.4-201ENSMUST00000224536 570 ntBASIC10.41□□□□□ -0.74
Trim41Q5NCC3 AC115289.1-201ENSMUST00000224915 522 ntBASIC10.41□□□□□ -0.74
Trim41Q5NCC3 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC10.41□□□□□ -0.74
Trim41Q5NCC3 Snord68-201ENSMUST00000082516 86 ntBASIC10.41□□□□□ -0.74
Trim41Q5NCC3 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Trim41Q5NCC3 Gm43886-201ENSMUST00000205039 2386 ntBASIC10.41□□□□□ -0.74
Trim41Q5NCC3 Gm8750-201ENSMUST00000173278 1537 ntBASIC10.41□□□□□ -0.74
Trim41Q5NCC3 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trim41Q5NCC3 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trim41Q5NCC3 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trim41Q5NCC3 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.74
Trim41Q5NCC3 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim41Q5NCC3 Gm12805-201ENSMUST00000117305 1048 ntBASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 97.9 ms