Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC7.12□□□□□ -1.27
Col17a1Q07563 Gm37993-201ENSMUST00000195301 988 ntBASIC7.12□□□□□ -1.27
Col17a1Q07563 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC7.12□□□□□ -1.27
Col17a1Q07563 Olfr1309-201ENSMUST00000207885 964 ntBASIC7.12□□□□□ -1.27
Col17a1Q07563 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Col17a1Q07563 AC121898.1-201ENSMUST00000227599 288 ntBASIC7.12□□□□□ -1.27
Col17a1Q07563 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC7.12□□□□□ -1.27
Col17a1Q07563 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC7.12□□□□□ -1.27
Col17a1Q07563 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Col17a1Q07563 Gm22977-201ENSMUST00000082615 107 ntBASIC7.12□□□□□ -1.27
Col17a1Q07563 Mir128-1-201ENSMUST00000083586 70 ntBASIC7.12□□□□□ -1.27
Col17a1Q07563 Gm10704-201ENSMUST00000098952 730 ntBASIC7.12□□□□□ -1.27
Col17a1Q07563 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Col17a1Q07563 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC7.12□□□□□ -1.27
Col17a1Q07563 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Col17a1Q07563 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Col17a1Q07563 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC7.12□□□□□ -1.27
Col17a1Q07563 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col17a1Q07563 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Col17a1Q07563 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col17a1Q07563 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC7.12□□□□□ -1.27
Col17a1Q07563 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC7.12□□□□□ -1.27
Col17a1Q07563 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC7.12□□□□□ -1.27
Col17a1Q07563 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Col17a1Q07563 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Col17a1Q07563 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC7.11□□□□□ -1.27
Col17a1Q07563 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC7.11□□□□□ -1.27
Col17a1Q07563 Gm14299-201ENSMUST00000117586 397 ntBASIC7.11□□□□□ -1.27
Col17a1Q07563 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC7.11□□□□□ -1.27
Col17a1Q07563 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Col17a1Q07563 Gm12041-201ENSMUST00000121606 602 ntBASIC7.11□□□□□ -1.27
Col17a1Q07563 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC7.11□□□□□ -1.27
Col17a1Q07563 Gm23365-201ENSMUST00000175019 125 ntBASIC7.11□□□□□ -1.27
Col17a1Q07563 Gm25960-201ENSMUST00000175110 125 ntBASIC7.11□□□□□ -1.27
Col17a1Q07563 Gm44453-201ENSMUST00000175161 126 ntBASIC7.11□□□□□ -1.27
Col17a1Q07563 Gm25195-201ENSMUST00000177656 126 ntBASIC7.11□□□□□ -1.27
Col17a1Q07563 Gm28384-201ENSMUST00000189079 463 ntBASIC7.11□□□□□ -1.27
Col17a1Q07563 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC7.11□□□□□ -1.27
Col17a1Q07563 Gm45245-201ENSMUST00000210082 376 ntBASIC7.11□□□□□ -1.27
Col17a1Q07563 Gm18320-201ENSMUST00000211304 595 ntBASIC7.11□□□□□ -1.27
Col17a1Q07563 AC152979.4-201ENSMUST00000219893 379 ntBASIC7.11□□□□□ -1.27
Col17a1Q07563 AC168880.1-201ENSMUST00000225113 707 ntBASIC7.11□□□□□ -1.27
Col17a1Q07563 Ube2nl-201ENSMUST00000085228 456 ntBASIC7.11□□□□□ -1.27
Col17a1Q07563 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col17a1Q07563 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Col17a1Q07563 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Col17a1Q07563 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
Col17a1Q07563 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Col17a1Q07563 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col17a1Q07563 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col17a1Q07563 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col17a1Q07563 Gm37262-201ENSMUST00000192816 1818 ntBASIC7.11□□□□□ -1.27
Col17a1Q07563 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Col17a1Q07563 Gm44739-201ENSMUST00000205294 1426 ntBASIC7.11□□□□□ -1.27
Col17a1Q07563 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col17a1Q07563 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col17a1Q07563 Gm37890-201ENSMUST00000195610 3992 ntBASIC7.11□□□□□ -1.27
Col17a1Q07563 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col17a1Q07563 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Col17a1Q07563 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Col17a1Q07563 Gm15426-201ENSMUST00000117823 556 ntBASIC7.11□□□□□ -1.27
Col17a1Q07563 Gm14560-201ENSMUST00000118672 375 ntBASIC7.11□□□□□ -1.27
Col17a1Q07563 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC7.11□□□□□ -1.27
Col17a1Q07563 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC7.11□□□□□ -1.27
Col17a1Q07563 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Col17a1Q07563 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Col17a1Q07563 Gm22320-201ENSMUST00000157149 312 ntBASIC7.11□□□□□ -1.27
Col17a1Q07563 Gm17060-201ENSMUST00000172394 824 ntBASIC7.11□□□□□ -1.27
Col17a1Q07563 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC7.11□□□□□ -1.27
Col17a1Q07563 Gm3454-201ENSMUST00000185571 412 ntBASIC7.11□□□□□ -1.27
Col17a1Q07563 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Col17a1Q07563 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col17a1Q07563 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC7.11□□□□□ -1.27
Col17a1Q07563 Trav15d-3-201ENSMUST00000198604 167 ntBASIC7.11□□□□□ -1.27
Col17a1Q07563 Gm9245-201ENSMUST00000200528 983 ntBASIC7.11□□□□□ -1.27
Col17a1Q07563 Gm43810-201ENSMUST00000201018 232 ntBASIC7.11□□□□□ -1.27
Col17a1Q07563 Gm18537-201ENSMUST00000205709 989 ntBASIC7.11□□□□□ -1.27
Col17a1Q07563 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC7.11□□□□□ -1.27
Col17a1Q07563 Gm45409-201ENSMUST00000211486 252 ntBASIC7.11□□□□□ -1.27
Col17a1Q07563 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Col17a1Q07563 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC7.11□□□□□ -1.27
Col17a1Q07563 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC7.11□□□□□ -1.27
Col17a1Q07563 AC137950.3-201ENSMUST00000228250 246 ntBASIC7.11□□□□□ -1.27
Col17a1Q07563 n-R5s162-201ENSMUST00000082581 119 ntBASIC7.11□□□□□ -1.27
Col17a1Q07563 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
Col17a1Q07563 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Col17a1Q07563 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Col17a1Q07563 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Col17a1Q07563 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Col17a1Q07563 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC7.1□□□□□ -1.27
Col17a1Q07563 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Col17a1Q07563 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col17a1Q07563 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Col17a1Q07563 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Col17a1Q07563 Gm45424-201ENSMUST00000210575 3300 ntBASIC7.1□□□□□ -1.27
Col17a1Q07563 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col17a1Q07563 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Col17a1Q07563 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col17a1Q07563 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Col17a1Q07563 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms