Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Sox1P53783 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Sox1P53783 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC5.93□□□□□ -1.46
Sox1P53783 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox1P53783 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Sox1P53783 AC134596.1-201ENSMUST00000222016 1922 ntBASIC5.93□□□□□ -1.46
Sox1P53783 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox1P53783 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox1P53783 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox1P53783 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sox1P53783 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sox1P53783 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sox1P53783 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Sox1P53783 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sox1P53783 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sox1P53783 CT030159.1-201ENSMUST00000221580 2261 ntBASIC5.92□□□□□ -1.46
Sox1P53783 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sox1P53783 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Sox1P53783 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sox1P53783 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sox1P53783 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Sox1P53783 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Sox1P53783 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sox1P53783 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
Sox1P53783 Abcc2-202ENSMUST00000099413 1926 ntBASIC5.92□□□□□ -1.46
Sox1P53783 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Sox1P53783 Robo2-210ENSMUST00000226478 8059 ntBASIC5.92□□□□□ -1.46
Sox1P53783 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sox1P53783 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Sox1P53783 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Sox1P53783 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Sox1P53783 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Sox1P53783 Gm14385-201ENSMUST00000116315 876 ntBASIC5.92□□□□□ -1.46
Sox1P53783 Gm13770-201ENSMUST00000117149 305 ntBASIC5.92□□□□□ -1.46
Sox1P53783 Gm13331-201ENSMUST00000117500 448 ntBASIC5.92□□□□□ -1.46
Sox1P53783 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC5.92□□□□□ -1.46
Sox1P53783 Gm15670-201ENSMUST00000117740 447 ntBASIC5.92□□□□□ -1.46
Sox1P53783 Gm5405-201ENSMUST00000120478 609 ntBASIC5.92□□□□□ -1.46
Sox1P53783 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC5.92□□□□□ -1.46
Sox1P53783 Gm12488-201ENSMUST00000122449 499 ntBASIC5.92□□□□□ -1.46
Sox1P53783 Gm22479-201ENSMUST00000122566 81 ntBASIC5.92□□□□□ -1.46
Sox1P53783 Gm23118-201ENSMUST00000122657 187 ntBASIC5.92□□□□□ -1.46
Sox1P53783 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sox1P53783 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sox1P53783 Gm24692-201ENSMUST00000157761 146 ntBASIC5.92□□□□□ -1.46
Sox1P53783 Gm23542-201ENSMUST00000158208 96 ntBASIC5.92□□□□□ -1.46
Sox1P53783 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Sox1P53783 Gm24810-201ENSMUST00000175317 70 ntBASIC5.92□□□□□ -1.46
Sox1P53783 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC5.92□□□□□ -1.46
Sox1P53783 Gm23648-201ENSMUST00000180301 107 ntBASIC5.92□□□□□ -1.46
Sox1P53783 Gm27660-201ENSMUST00000184028 208 ntBASIC5.92□□□□□ -1.46
Sox1P53783 Gm4854-201ENSMUST00000185902 574 ntBASIC5.92□□□□□ -1.46
Sox1P53783 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC5.92□□□□□ -1.46
Sox1P53783 Gm9687-201ENSMUST00000189312 602 ntBASIC5.92□□□□□ -1.46
Sox1P53783 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC5.92□□□□□ -1.46
Sox1P53783 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC5.92□□□□□ -1.46
Sox1P53783 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sox1P53783 AC134333.1-201ENSMUST00000204536 944 ntBASIC5.92□□□□□ -1.46
Sox1P53783 Gm44927-201ENSMUST00000207573 716 ntBASIC5.92□□□□□ -1.46
Sox1P53783 AC162387.1-201ENSMUST00000213369 213 ntBASIC5.92□□□□□ -1.46
Sox1P53783 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Sox1P53783 Gm7042-201ENSMUST00000223027 384 ntBASIC5.92□□□□□ -1.46
Sox1P53783 AC115878.1-201ENSMUST00000227247 334 ntBASIC5.92□□□□□ -1.46
Sox1P53783 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Sox1P53783 Gm4963-201ENSMUST00000072718 378 ntBASIC5.92□□□□□ -1.46
Sox1P53783 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC5.92□□□□□ -1.46
Sox1P53783 Gm23506-201ENSMUST00000083077 107 ntBASIC5.92□□□□□ -1.46
Sox1P53783 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sox1P53783 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sox1P53783 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
Sox1P53783 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sox1P53783 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
Sox1P53783 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC5.92□□□□□ -1.46
Sox1P53783 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sox1P53783 AC156031.1-201ENSMUST00000217288 2555 ntBASIC5.92□□□□□ -1.46
Sox1P53783 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Sox1P53783 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Sox1P53783 AC131747.2-201ENSMUST00000226121 1895 ntBASIC5.92□□□□□ -1.46
Sox1P53783 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Sox1P53783 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Sox1P53783 Gm44587-201ENSMUST00000207399 1685 ntBASIC5.91□□□□□ -1.46
Sox1P53783 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Sox1P53783 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox1P53783 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox1P53783 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox1P53783 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Sox1P53783 Gm18180-201ENSMUST00000187562 1484 ntBASIC5.91□□□□□ -1.46
Sox1P53783 Dnm3os-201ENSMUST00000139662 7928 ntBASIC5.91□□□□□ -1.46
Sox1P53783 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.91□□□□□ -1.46
Sox1P53783 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Sox1P53783 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Sox1P53783 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Sox1P53783 Gm14750-201ENSMUST00000118262 516 ntBASIC5.91□□□□□ -1.46
Sox1P53783 Gm7429-201ENSMUST00000118664 348 ntBASIC5.91□□□□□ -1.46
Sox1P53783 Gm12677-201ENSMUST00000118668 426 ntBASIC5.91□□□□□ -1.46
Sox1P53783 Gm13213-201ENSMUST00000119668 474 ntBASIC5.91□□□□□ -1.46
Sox1P53783 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC5.91□□□□□ -1.46
Sox1P53783 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Sox1P53783 Gm26098-201ENSMUST00000157247 288 ntBASIC5.91□□□□□ -1.46
Sox1P53783 Gm22819-201ENSMUST00000157445 303 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms