Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC4.73□□□□□ -1.65
Col1a1P11087 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.73□□□□□ -1.65
Col1a1P11087 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.73□□□□□ -1.65
Col1a1P11087 Gm38031-201ENSMUST00000191819 3015 ntBASIC4.73□□□□□ -1.65
Col1a1P11087 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.72□□□□□ -1.65
Col1a1P11087 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Col1a1P11087 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col1a1P11087 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.72□□□□□ -1.65
Col1a1P11087 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col1a1P11087 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Col1a1P11087 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Col1a1P11087 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC4.72□□□□□ -1.65
Col1a1P11087 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col1a1P11087 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Col1a1P11087 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Col1a1P11087 Gm25436-201ENSMUST00000158275 145 ntBASIC4.72□□□□□ -1.65
Col1a1P11087 Gm6900-201ENSMUST00000178971 342 ntBASIC4.72□□□□□ -1.65
Col1a1P11087 Mir7676-1-201ENSMUST00000183491 62 ntBASIC4.72□□□□□ -1.65
Col1a1P11087 Mir7676-2-201ENSMUST00000183523 62 ntBASIC4.72□□□□□ -1.65
Col1a1P11087 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC4.72□□□□□ -1.65
Col1a1P11087 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.72□□□□□ -1.65
Col1a1P11087 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC4.72□□□□□ -1.65
Col1a1P11087 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Col1a1P11087 AC123705.2-201ENSMUST00000221653 2009 ntBASIC4.72□□□□□ -1.65
Col1a1P11087 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col1a1P11087 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col1a1P11087 AC124572.2-201ENSMUST00000218041 5152 ntBASIC4.72□□□□□ -1.65
Col1a1P11087 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC4.72□□□□□ -1.65
Col1a1P11087 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col1a1P11087 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col1a1P11087 Gm15902-202ENSMUST00000219623 3477 ntBASIC4.72□□□□□ -1.65
Col1a1P11087 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Col1a1P11087 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.72□□□□□ -1.65
Col1a1P11087 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
Col1a1P11087 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Col1a1P11087 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Col1a1P11087 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
Col1a1P11087 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
Col1a1P11087 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Col1a1P11087 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.71□□□□□ -1.66
Col1a1P11087 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Col1a1P11087 Gm12276-201ENSMUST00000121709 301 ntBASIC4.71□□□□□ -1.66
Col1a1P11087 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Col1a1P11087 Gm26373-201ENSMUST00000157833 103 ntBASIC4.71□□□□□ -1.66
Col1a1P11087 Gm23666-201ENSMUST00000158053 116 ntBASIC4.71□□□□□ -1.66
Col1a1P11087 Gm16134-201ENSMUST00000161714 336 ntBASIC4.71□□□□□ -1.66
Col1a1P11087 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC4.71□□□□□ -1.66
Col1a1P11087 Gm12582-201ENSMUST00000030555 697 ntBASIC4.71□□□□□ -1.66
Col1a1P11087 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.71□□□□□ -1.66
Col1a1P11087 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC4.71□□□□□ -1.66
Col1a1P11087 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.71□□□□□ -1.66
Col1a1P11087 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Col1a1P11087 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col1a1P11087 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
Col1a1P11087 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Col1a1P11087 Gm29730-201ENSMUST00000192986 1396 ntBASIC4.71□□□□□ -1.66
Col1a1P11087 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col1a1P11087 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Col1a1P11087 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col1a1P11087 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col1a1P11087 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Col1a1P11087 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Col1a1P11087 Gm22115-201ENSMUST00000103976 133 ntBASIC4.7□□□□□ -1.66
Col1a1P11087 Gm23923-201ENSMUST00000104108 133 ntBASIC4.7□□□□□ -1.66
Col1a1P11087 Gm12311-201ENSMUST00000118803 374 ntBASIC4.7□□□□□ -1.66
Col1a1P11087 Gm12564-201ENSMUST00000119860 321 ntBASIC4.7□□□□□ -1.66
Col1a1P11087 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC4.7□□□□□ -1.66
Col1a1P11087 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Col1a1P11087 Gm26320-201ENSMUST00000157742 306 ntBASIC4.7□□□□□ -1.66
Col1a1P11087 Gm17155-201ENSMUST00000165969 473 ntBASIC4.7□□□□□ -1.66
Col1a1P11087 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC4.7□□□□□ -1.66
Col1a1P11087 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC4.7□□□□□ -1.66
Col1a1P11087 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC4.7□□□□□ -1.66
Col1a1P11087 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC4.7□□□□□ -1.66
Col1a1P11087 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Col1a1P11087 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC4.7□□□□□ -1.66
Col1a1P11087 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC4.7□□□□□ -1.66
Col1a1P11087 Igkv11-118-201ENSMUST00000199448 346 ntBASIC4.7□□□□□ -1.66
Col1a1P11087 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC4.7□□□□□ -1.66
Col1a1P11087 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC4.7□□□□□ -1.66
Col1a1P11087 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC4.7□□□□□ -1.66
Col1a1P11087 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.7□□□□□ -1.66
Col1a1P11087 AC154634.3-201ENSMUST00000224589 736 ntBASIC4.7□□□□□ -1.66
Col1a1P11087 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.7□□□□□ -1.66
Col1a1P11087 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col1a1P11087 Gm22739-201ENSMUST00000083437 160 ntBASIC4.7□□□□□ -1.66
Col1a1P11087 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col1a1P11087 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col1a1P11087 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Col1a1P11087 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col1a1P11087 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col1a1P11087 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col1a1P11087 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Col1a1P11087 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.7□□□□□ -1.66
Col1a1P11087 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col1a1P11087 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC4.69□□□□□ -1.66
Col1a1P11087 Gm22590-201ENSMUST00000104247 128 ntBASIC4.69□□□□□ -1.66
Col1a1P11087 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col1a1P11087 Gm14516-201ENSMUST00000120012 252 ntBASIC4.69□□□□□ -1.66
Col1a1P11087 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms