Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gm29097-201ENSMUST00000190273 422 ntBASIC4.4□□□□□ -1.71
Hcn1O88704 Gm37272-201ENSMUST00000193401 488 ntBASIC4.4□□□□□ -1.71
Hcn1O88704 Gm33973-201ENSMUST00000195148 534 ntBASIC4.4□□□□□ -1.71
Hcn1O88704 Gm3933-201ENSMUST00000195391 439 ntBASIC4.4□□□□□ -1.71
Hcn1O88704 Gm6719-201ENSMUST00000202067 335 ntBASIC4.4□□□□□ -1.71
Hcn1O88704 Gm5339-201ENSMUST00000210551 1102 ntBASIC4.4□□□□□ -1.71
Hcn1O88704 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Hcn1O88704 Gm36247-201ENSMUST00000211834 285 ntBASIC4.4□□□□□ -1.71
Hcn1O88704 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Hcn1O88704 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC4.4□□□□□ -1.71
Hcn1O88704 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Hcn1O88704 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Hcn1O88704 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Hcn1O88704 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Hcn1O88704 Snora52-201ENSMUST00000082732 137 ntBASIC4.4□□□□□ -1.71
Hcn1O88704 Gm22826-201ENSMUST00000083774 165 ntBASIC4.4□□□□□ -1.71
Hcn1O88704 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Hcn1O88704 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
Hcn1O88704 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.4□□□□□ -1.71
Hcn1O88704 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Hcn1O88704 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC4.4□□□□□ -1.71
Hcn1O88704 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
Hcn1O88704 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.4□□□□□ -1.71
Hcn1O88704 AC126439.1-201ENSMUST00000226772 2104 ntBASIC4.4□□□□□ -1.71
Hcn1O88704 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC4.4□□□□□ -1.71
Hcn1O88704 Gm10997-201ENSMUST00000210294 1500 ntBASIC4.4□□□□□ -1.71
Hcn1O88704 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.4□□□□□ -1.71
Hcn1O88704 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Hcn1O88704 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Hcn1O88704 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Hcn1O88704 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
Hcn1O88704 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.4□□□□□ -1.71
Hcn1O88704 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Hcn1O88704 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
Hcn1O88704 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
Hcn1O88704 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
Hcn1O88704 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Hcn1O88704 Gm43888-201ENSMUST00000204405 2587 ntBASIC4.39□□□□□ -1.71
Hcn1O88704 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Hcn1O88704 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Hcn1O88704 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC4.39□□□□□ -1.71
Hcn1O88704 Gm15159-201ENSMUST00000117062 764 ntBASIC4.39□□□□□ -1.71
Hcn1O88704 Gm8569-201ENSMUST00000117630 647 ntBASIC4.39□□□□□ -1.71
Hcn1O88704 Gm14107-201ENSMUST00000117774 330 ntBASIC4.39□□□□□ -1.71
Hcn1O88704 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC4.39□□□□□ -1.71
Hcn1O88704 Mup-ps13-201ENSMUST00000120662 545 ntBASIC4.39□□□□□ -1.71
Hcn1O88704 Mup-ps1-201ENSMUST00000120720 544 ntBASIC4.39□□□□□ -1.71
Hcn1O88704 Gm26034-201ENSMUST00000158154 116 ntBASIC4.39□□□□□ -1.71
Hcn1O88704 Gm24636-201ENSMUST00000158673 288 ntBASIC4.39□□□□□ -1.71
Hcn1O88704 Gm17038-201ENSMUST00000166586 494 ntBASIC4.39□□□□□ -1.71
Hcn1O88704 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
Hcn1O88704 Gm18604-201ENSMUST00000172535 558 ntBASIC4.39□□□□□ -1.71
Hcn1O88704 Gm21809-201ENSMUST00000178495 468 ntBASIC4.39□□□□□ -1.71
Hcn1O88704 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Hcn1O88704 Gm17412-201ENSMUST00000179261 468 ntBASIC4.39□□□□□ -1.71
Hcn1O88704 Gm25019-201ENSMUST00000179732 110 ntBASIC4.39□□□□□ -1.71
Hcn1O88704 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Hcn1O88704 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Hcn1O88704 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Hcn1O88704 Gm28503-201ENSMUST00000185966 147 ntBASIC4.39□□□□□ -1.71
Hcn1O88704 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC4.39□□□□□ -1.71
Hcn1O88704 Gm9775-201ENSMUST00000189402 331 ntBASIC4.39□□□□□ -1.71
Hcn1O88704 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC4.39□□□□□ -1.71
Hcn1O88704 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC4.39□□□□□ -1.71
Hcn1O88704 Gm18150-201ENSMUST00000195341 645 ntBASIC4.39□□□□□ -1.71
Hcn1O88704 Gm18340-201ENSMUST00000196342 609 ntBASIC4.39□□□□□ -1.71
Hcn1O88704 Gm18867-201ENSMUST00000198022 1179 ntBASIC4.39□□□□□ -1.71
Hcn1O88704 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.39□□□□□ -1.71
Hcn1O88704 Gm34224-201ENSMUST00000204606 364 ntBASIC4.39□□□□□ -1.71
Hcn1O88704 Gm46138-201ENSMUST00000215294 426 ntBASIC4.39□□□□□ -1.71
Hcn1O88704 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC4.39□□□□□ -1.71
Hcn1O88704 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC4.39□□□□□ -1.71
Hcn1O88704 AC158392.1-201ENSMUST00000223720 1069 ntBASIC4.39□□□□□ -1.71
Hcn1O88704 Ap3m1-208ENSMUST00000224016 764 ntBASIC4.39□□□□□ -1.71
Hcn1O88704 AC159256.1-201ENSMUST00000224298 1039 ntBASIC4.39□□□□□ -1.71
Hcn1O88704 AC140393.2-201ENSMUST00000226894 943 ntBASIC4.39□□□□□ -1.71
Hcn1O88704 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Hcn1O88704 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
Hcn1O88704 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Hcn1O88704 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Hcn1O88704 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Hcn1O88704 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Hcn1O88704 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Hcn1O88704 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
Hcn1O88704 AC153881.3-201ENSMUST00000218494 1561 ntBASIC4.39□□□□□ -1.71
Hcn1O88704 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Hcn1O88704 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Hcn1O88704 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.39□□□□□ -1.71
Hcn1O88704 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Hcn1O88704 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.38□□□□□ -1.71
Hcn1O88704 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Hcn1O88704 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
Hcn1O88704 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hcn1O88704 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Hcn1O88704 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Hcn1O88704 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Hcn1O88704 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Hcn1O88704 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hcn1O88704 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hcn1O88704 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 162.2 ms