Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Vps53Q8CCB4 Gm24925-201ENSMUST00000178157 107 ntBASIC5.65□□□□□ -1.5
Vps53Q8CCB4 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Vps53Q8CCB4 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Vps53Q8CCB4 Gm9443-201ENSMUST00000188406 816 ntBASIC5.65□□□□□ -1.5
Vps53Q8CCB4 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Vps53Q8CCB4 Gm19066-201ENSMUST00000193232 1078 ntBASIC5.65□□□□□ -1.5
Vps53Q8CCB4 Gm43582-201ENSMUST00000196149 343 ntBASIC5.65□□□□□ -1.5
Vps53Q8CCB4 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Vps53Q8CCB4 Gm6719-201ENSMUST00000202067 335 ntBASIC5.65□□□□□ -1.5
Vps53Q8CCB4 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC5.65□□□□□ -1.5
Vps53Q8CCB4 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Vps53Q8CCB4 Gm9655-201ENSMUST00000211321 1284 ntBASIC5.65□□□□□ -1.5
Vps53Q8CCB4 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.65□□□□□ -1.5
Vps53Q8CCB4 AC115047.1-201ENSMUST00000213795 322 ntBASIC5.65□□□□□ -1.5
Vps53Q8CCB4 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC5.65□□□□□ -1.5
Vps53Q8CCB4 AC132237.2-201ENSMUST00000221702 1209 ntBASIC5.65□□□□□ -1.5
Vps53Q8CCB4 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC5.65□□□□□ -1.5
Vps53Q8CCB4 AC154552.5-201ENSMUST00000222352 207 ntBASIC5.65□□□□□ -1.5
Vps53Q8CCB4 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Vps53Q8CCB4 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
Vps53Q8CCB4 Gm24207-201ENSMUST00000082781 108 ntBASIC5.65□□□□□ -1.5
Vps53Q8CCB4 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Vps53Q8CCB4 Gm42616-201ENSMUST00000198989 4184 ntBASIC5.65□□□□□ -1.51
Vps53Q8CCB4 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
Vps53Q8CCB4 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Vps53Q8CCB4 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Vps53Q8CCB4 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.51
Vps53Q8CCB4 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Vps53Q8CCB4 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Vps53Q8CCB4 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
Vps53Q8CCB4 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC5.65□□□□□ -1.51
Vps53Q8CCB4 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Vps53Q8CCB4 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Vps53Q8CCB4 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Gm14385-201ENSMUST00000116315 876 ntBASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Gm12041-201ENSMUST00000121606 602 ntBASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Gm14800-201ENSMUST00000122084 1272 ntBASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Gm16114-201ENSMUST00000161930 300 ntBASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Gm17081-201ENSMUST00000167363 478 ntBASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Gm2930-201ENSMUST00000170403 474 ntBASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Gm17152-201ENSMUST00000172430 535 ntBASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Gm10074-201ENSMUST00000174543 249 ntBASIC5.64□□□□□ -1.51
Vps53Q8CCB4 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Gm8614-201ENSMUST00000182528 978 ntBASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Gm2497-201ENSMUST00000189539 601 ntBASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Gm38279-201ENSMUST00000194067 1131 ntBASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Gm17935-201ENSMUST00000196649 772 ntBASIC5.64□□□□□ -1.51
Vps53Q8CCB4 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Trav3-2-201ENSMUST00000198999 305 ntBASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Gm32308-201ENSMUST00000203053 280 ntBASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC5.64□□□□□ -1.51
Vps53Q8CCB4 AC138284.2-201ENSMUST00000213982 567 ntBASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Gm7045-201ENSMUST00000221466 605 ntBASIC5.64□□□□□ -1.51
Vps53Q8CCB4 AC158955.1-201ENSMUST00000227140 385 ntBASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Gm12667-201ENSMUST00000118299 1332 ntBASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Gm43266-201ENSMUST00000201049 1771 ntBASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Gm37588-201ENSMUST00000195024 2496 ntBASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Vps53Q8CCB4 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Vps53Q8CCB4 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Vps53Q8CCB4 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Vps53Q8CCB4 Gm43313-201ENSMUST00000201398 2235 ntBASIC5.63□□□□□ -1.51
Vps53Q8CCB4 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Vps53Q8CCB4 AC131743.1-201ENSMUST00000222138 4024 ntBASIC5.63□□□□□ -1.51
Vps53Q8CCB4 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Vps53Q8CCB4 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.63□□□□□ -1.51
Vps53Q8CCB4 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Vps53Q8CCB4 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Vps53Q8CCB4 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Vps53Q8CCB4 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Vps53Q8CCB4 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Vps53Q8CCB4 Gm24125-201ENSMUST00000104105 137 ntBASIC5.63□□□□□ -1.51
Vps53Q8CCB4 Mir879-201ENSMUST00000104703 76 ntBASIC5.63□□□□□ -1.51
Vps53Q8CCB4 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Vps53Q8CCB4 Gm15110-201ENSMUST00000117545 881 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms