Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 AC121898.1-201ENSMUST00000227599 288 ntBASIC4.35□□□□□ -1.71
Cxcl12P40224 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Cxcl12P40224 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Cxcl12P40224 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Cxcl12P40224 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Cxcl12P40224 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Cxcl12P40224 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Cxcl12P40224 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Cxcl12P40224 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Cxcl12P40224 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
Cxcl12P40224 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
Cxcl12P40224 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Cxcl12P40224 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Cxcl12P40224 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Cxcl12P40224 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC4.35□□□□□ -1.71
Cxcl12P40224 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Cxcl12P40224 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Cxcl12P40224 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Cxcl12P40224 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Cxcl12P40224 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Cxcl12P40224 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Cxcl12P40224 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC4.34□□□□□ -1.71
Cxcl12P40224 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Cxcl12P40224 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Cxcl12P40224 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.34□□□□□ -1.71
Cxcl12P40224 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Cxcl12P40224 Defa-ps9-201ENSMUST00000118264 276 ntBASIC4.34□□□□□ -1.71
Cxcl12P40224 Gm11742-201ENSMUST00000119903 233 ntBASIC4.34□□□□□ -1.71
Cxcl12P40224 Gm13118-201ENSMUST00000120402 549 ntBASIC4.34□□□□□ -1.71
Cxcl12P40224 Gm14739-201ENSMUST00000120424 802 ntBASIC4.34□□□□□ -1.71
Cxcl12P40224 Gm10059-201ENSMUST00000131139 171 ntBASIC4.34□□□□□ -1.71
Cxcl12P40224 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC4.34□□□□□ -1.71
Cxcl12P40224 Gm26148-201ENSMUST00000157430 68 ntBASIC4.34□□□□□ -1.71
Cxcl12P40224 Gm22840-201ENSMUST00000158444 136 ntBASIC4.34□□□□□ -1.71
Cxcl12P40224 Gm22889-201ENSMUST00000158639 58 ntBASIC4.34□□□□□ -1.71
Cxcl12P40224 Gm4134-201ENSMUST00000173244 563 ntBASIC4.34□□□□□ -1.71
Cxcl12P40224 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Cxcl12P40224 Gm28655-201ENSMUST00000191538 692 ntBASIC4.34□□□□□ -1.71
Cxcl12P40224 Gm42694-201ENSMUST00000196951 358 ntBASIC4.34□□□□□ -1.71
Cxcl12P40224 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.34□□□□□ -1.71
Cxcl12P40224 Gm22897-202ENSMUST00000197782 127 ntBASIC4.34□□□□□ -1.71
Cxcl12P40224 Gm7041-201ENSMUST00000201227 524 ntBASIC4.34□□□□□ -1.71
Cxcl12P40224 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC4.34□□□□□ -1.71
Cxcl12P40224 Gm18891-201ENSMUST00000216734 1087 ntBASIC4.34□□□□□ -1.71
Cxcl12P40224 AC131117.1-201ENSMUST00000225154 1171 ntBASIC4.34□□□□□ -1.71
Cxcl12P40224 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Cxcl12P40224 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Cxcl12P40224 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.34□□□□□ -1.71
Cxcl12P40224 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC4.34□□□□□ -1.71
Cxcl12P40224 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Cxcl12P40224 Gm28240-201ENSMUST00000187560 2053 ntBASIC4.34□□□□□ -1.71
Cxcl12P40224 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Cxcl12P40224 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
Cxcl12P40224 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.72
Cxcl12P40224 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Cxcl12P40224 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC4.34□□□□□ -1.72
Cxcl12P40224 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Cxcl12P40224 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Cxcl12P40224 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
Cxcl12P40224 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Cxcl12P40224 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Cxcl12P40224 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Cxcl12P40224 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Cxcl12P40224 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Cxcl12P40224 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
Cxcl12P40224 Gm15018-201ENSMUST00000117090 633 ntBASIC4.33□□□□□ -1.72
Cxcl12P40224 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC4.33□□□□□ -1.72
Cxcl12P40224 Gm11781-201ENSMUST00000118328 472 ntBASIC4.33□□□□□ -1.72
Cxcl12P40224 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC4.33□□□□□ -1.72
Cxcl12P40224 Gm15022-201ENSMUST00000122074 746 ntBASIC4.33□□□□□ -1.72
Cxcl12P40224 Gm11692-201ENSMUST00000122121 902 ntBASIC4.33□□□□□ -1.72
Cxcl12P40224 Gm22480-201ENSMUST00000122568 128 ntBASIC4.33□□□□□ -1.72
Cxcl12P40224 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC4.33□□□□□ -1.72
Cxcl12P40224 Gm23540-201ENSMUST00000157543 164 ntBASIC4.33□□□□□ -1.72
Cxcl12P40224 Gm23084-201ENSMUST00000157850 114 ntBASIC4.33□□□□□ -1.72
Cxcl12P40224 Gm7241-201ENSMUST00000159853 357 ntBASIC4.33□□□□□ -1.72
Cxcl12P40224 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.33□□□□□ -1.72
Cxcl12P40224 Gm24949-201ENSMUST00000183609 215 ntBASIC4.33□□□□□ -1.72
Cxcl12P40224 Gm27160-201ENSMUST00000184837 199 ntBASIC4.33□□□□□ -1.72
Cxcl12P40224 Gm27190-201ENSMUST00000184890 542 ntBASIC4.33□□□□□ -1.72
Cxcl12P40224 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC4.33□□□□□ -1.72
Cxcl12P40224 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Cxcl12P40224 Gm29634-201ENSMUST00000188467 696 ntBASIC4.33□□□□□ -1.72
Cxcl12P40224 Gm28699-201ENSMUST00000189193 696 ntBASIC4.33□□□□□ -1.72
Cxcl12P40224 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Cxcl12P40224 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Cxcl12P40224 Gm38098-201ENSMUST00000194115 241 ntBASIC4.33□□□□□ -1.72
Cxcl12P40224 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC4.33□□□□□ -1.72
Cxcl12P40224 Gm19243-201ENSMUST00000198592 269 ntBASIC4.33□□□□□ -1.72
Cxcl12P40224 Gm43717-201ENSMUST00000198684 310 ntBASIC4.33□□□□□ -1.72
Cxcl12P40224 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Cxcl12P40224 Gm6261-201ENSMUST00000204707 760 ntBASIC4.33□□□□□ -1.72
Cxcl12P40224 Gm19196-201ENSMUST00000209258 357 ntBASIC4.33□□□□□ -1.72
Cxcl12P40224 Gm45245-201ENSMUST00000210082 376 ntBASIC4.33□□□□□ -1.72
Cxcl12P40224 Gm6929-201ENSMUST00000210930 468 ntBASIC4.33□□□□□ -1.72
Cxcl12P40224 Olfr936-202ENSMUST00000216912 937 ntBASIC4.33□□□□□ -1.72
Cxcl12P40224 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Cxcl12P40224 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.33□□□□□ -1.72
Cxcl12P40224 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC4.33□□□□□ -1.72
Cxcl12P40224 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 116.6 ms