Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Gm2287-202ENSMUST00000199619 1000 ntBASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Gm43105-201ENSMUST00000202987 459 ntBASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Gm45026-201ENSMUST00000205292 833 ntBASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Gm45049-201ENSMUST00000207586 591 ntBASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Gm45628-201ENSMUST00000210849 274 ntBASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 CT025689.4-201ENSMUST00000225926 601 ntBASIC6.69□□□□□ -1.34
Trim47Q8C0E3 AC127371.1-201ENSMUST00000228516 312 ntBASIC6.69□□□□□ -1.34
Trim47Q8C0E3 AC170600.1-201ENSMUST00000228763 277 ntBASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Trim47Q8C0E3 Gm43088-201ENSMUST00000197530 2347 ntBASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Gm37238-201ENSMUST00000195552 2390 ntBASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Gm20486-201ENSMUST00000101544 128 ntBASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Gm26067-201ENSMUST00000103789 110 ntBASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Gm14382-201ENSMUST00000117374 437 ntBASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Gm11313-201ENSMUST00000118779 432 ntBASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Gm7927-201ENSMUST00000118818 880 ntBASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Gm15211-201ENSMUST00000118932 528 ntBASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Gm11852-201ENSMUST00000120806 222 ntBASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Gm23995-201ENSMUST00000158060 129 ntBASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Mir3471-2-201ENSMUST00000174896 102 ntBASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Gm18553-201ENSMUST00000194152 634 ntBASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Gm44634-201ENSMUST00000206119 152 ntBASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Gm45185-201ENSMUST00000207556 404 ntBASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Gm45742-201ENSMUST00000212400 433 ntBASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Gm20786-201ENSMUST00000212649 436 ntBASIC6.68□□□□□ -1.34
Trim47Q8C0E3 AC133650.1-201ENSMUST00000217243 578 ntBASIC6.68□□□□□ -1.34
Trim47Q8C0E3 AC156037.1-201ENSMUST00000221133 127 ntBASIC6.68□□□□□ -1.34
Trim47Q8C0E3 AC125543.3-201ENSMUST00000221991 126 ntBASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Snord68-201ENSMUST00000082516 86 ntBASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Gm23503-201ENSMUST00000083903 107 ntBASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.68□□□□□ -1.34
Trim47Q8C0E3 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Gm37926-201ENSMUST00000191922 2424 ntBASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Gm43317-201ENSMUST00000197924 2544 ntBASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Trim47Q8C0E3 Gm20300-201ENSMUST00000214634 3440 ntBASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim47Q8C0E3 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim47Q8C0E3 AC159244.3-201ENSMUST00000222887 3153 ntBASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Gm36947-201ENSMUST00000194709 2249 ntBASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Gm25345-201ENSMUST00000104505 133 ntBASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Gm13428-201ENSMUST00000117540 365 ntBASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Gm13880-201ENSMUST00000118421 474 ntBASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Gm12722-201ENSMUST00000118507 493 ntBASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms