Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm38234-201ENSMUST00000195204 421 ntBASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Gm43779-201ENSMUST00000196691 829 ntBASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Gm43018-201ENSMUST00000198075 1275 ntBASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Gm42621-201ENSMUST00000198114 275 ntBASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Gm43144-201ENSMUST00000198256 485 ntBASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Gm45189-201ENSMUST00000208567 363 ntBASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Gm9088-201ENSMUST00000220237 508 ntBASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 AC156037.1-201ENSMUST00000221133 127 ntBASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 AC125543.3-201ENSMUST00000221991 126 ntBASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Gm5582-201ENSMUST00000075251 522 ntBASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Gm26176-201ENSMUST00000083795 105 ntBASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Gm13712-201ENSMUST00000117484 2295 ntBASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 AC156569.1-201ENSMUST00000222020 3841 ntBASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 AC166358.5-201ENSMUST00000220706 1302 ntBASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Gm15332-201ENSMUST00000118386 357 ntBASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Gm14835-201ENSMUST00000119039 315 ntBASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Gm11262-201ENSMUST00000119326 833 ntBASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Gm14821-201ENSMUST00000121975 435 ntBASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Mup-ps2-201ENSMUST00000142602 533 ntBASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Gm25185-201ENSMUST00000157754 96 ntBASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Gm26086-201ENSMUST00000157902 263 ntBASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Gm25459-201ENSMUST00000157953 114 ntBASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Gm9006-201ENSMUST00000165520 841 ntBASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Gm17929-201ENSMUST00000186851 627 ntBASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Gm4322-201ENSMUST00000191094 336 ntBASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Gm38131-201ENSMUST00000192449 430 ntBASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Gm2979-201ENSMUST00000193442 463 ntBASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Gm18423-201ENSMUST00000205144 1074 ntBASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Gm44923-201ENSMUST00000206673 85 ntBASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Gm8863-201ENSMUST00000216630 926 ntBASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 AC154257.2-201ENSMUST00000224166 340 ntBASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 AC131745.2-201ENSMUST00000225736 565 ntBASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 AC133101.1-201ENSMUST00000226939 1199 ntBASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 AC124709.3-201ENSMUST00000227294 171 ntBASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 AC154616.2-201ENSMUST00000227978 398 ntBASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 AC121978.1-201ENSMUST00000228357 380 ntBASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Gm25401-201ENSMUST00000082975 106 ntBASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Gm43662-201ENSMUST00000198310 2271 ntBASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Sh3rf1Q69ZI1 AC107645.1-201ENSMUST00000228660 1810 ntBASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Gm14046-201ENSMUST00000119389 509 ntBASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Gm22073-201ENSMUST00000122668 189 ntBASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms