Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Gm25079-201ENSMUST00000082529 203 ntBASIC5.59□□□□□ -1.51
Ssu72Q9CY97 n-R5s94-201ENSMUST00000082573 119 ntBASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.51
Ssu72Q9CY97 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
Ssu72Q9CY97 AC154612.1-202ENSMUST00000224806 1725 ntBASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Gm44625-201ENSMUST00000207838 1561 ntBASIC5.59□□□□□ -1.52
Ssu72Q9CY97 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Gm22656-201ENSMUST00000104199 171 ntBASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Gm13866-201ENSMUST00000118901 968 ntBASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Gm12515-201ENSMUST00000120116 361 ntBASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Gm11472-201ENSMUST00000121305 556 ntBASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Gm7931-201ENSMUST00000121537 271 ntBASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Gm15237-201ENSMUST00000122104 469 ntBASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Gm24901-201ENSMUST00000158125 110 ntBASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Gm22584-201ENSMUST00000177935 92 ntBASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Gm28579-201ENSMUST00000186143 369 ntBASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Gm5116-201ENSMUST00000187732 463 ntBASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Gm29627-201ENSMUST00000187984 463 ntBASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Gm5734-201ENSMUST00000189787 913 ntBASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Gm43494-201ENSMUST00000197672 388 ntBASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Igkv11-114-201ENSMUST00000200013 346 ntBASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Gm38430-201ENSMUST00000209888 1240 ntBASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Gm45742-201ENSMUST00000212400 433 ntBASIC5.58□□□□□ -1.52
Ssu72Q9CY97 AC158633.1-201ENSMUST00000219892 649 ntBASIC5.58□□□□□ -1.52
Ssu72Q9CY97 AC174082.1-201ENSMUST00000221106 307 ntBASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Gm18413-201ENSMUST00000221573 655 ntBASIC5.58□□□□□ -1.52
Ssu72Q9CY97 AC124489.2-201ENSMUST00000223930 589 ntBASIC5.58□□□□□ -1.52
Ssu72Q9CY97 CT573085.1-201ENSMUST00000224279 1197 ntBASIC5.58□□□□□ -1.52
Ssu72Q9CY97 AC161609.1-201ENSMUST00000225878 474 ntBASIC5.58□□□□□ -1.52
Ssu72Q9CY97 AC125539.2-201ENSMUST00000228339 753 ntBASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC5.58□□□□□ -1.52
Ssu72Q9CY97 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Gm38224-201ENSMUST00000191648 2100 ntBASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ssu72Q9CY97 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Gm6427-201ENSMUST00000118721 979 ntBASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Gm14128-201ENSMUST00000119514 1011 ntBASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Gm12804-201ENSMUST00000121030 999 ntBASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Gm12369-201ENSMUST00000121343 942 ntBASIC5.57□□□□□ -1.52
Ssu72Q9CY97 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Gm26350-201ENSMUST00000157531 288 ntBASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Gm25861-201ENSMUST00000158251 109 ntBASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Gm8338-201ENSMUST00000163928 363 ntBASIC5.57□□□□□ -1.52
Ssu72Q9CY97 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Mir7011-201ENSMUST00000183768 73 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms