Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm13603-201ENSMUST00000119404 83 ntBASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Gm7485-201ENSMUST00000119502 1109 ntBASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Gm14867-201ENSMUST00000120156 866 ntBASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Gm14392-201ENSMUST00000120332 401 ntBASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Gm12732-201ENSMUST00000121688 180 ntBASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Gm15075-201ENSMUST00000122187 477 ntBASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Gm15335-201ENSMUST00000122442 411 ntBASIC6.5□□□□□ -1.37
Trim11Q99PQ2 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Gm22951-201ENSMUST00000179471 107 ntBASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Gm27342-201ENSMUST00000183530 109 ntBASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Gm38185-201ENSMUST00000193195 694 ntBASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Gm43392-201ENSMUST00000196560 434 ntBASIC6.5□□□□□ -1.37
Trim11Q99PQ2 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Gm4083-201ENSMUST00000207158 451 ntBASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Gm7990-201ENSMUST00000212126 593 ntBASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC6.5□□□□□ -1.37
Trim11Q99PQ2 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC6.5□□□□□ -1.37
Trim11Q99PQ2 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Gm6068-201ENSMUST00000222270 387 ntBASIC6.5□□□□□ -1.37
Trim11Q99PQ2 AC158982.2-201ENSMUST00000226283 184 ntBASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Gm37485-201ENSMUST00000192326 2953 ntBASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim11Q99PQ2 AC159896.3-201ENSMUST00000215904 3835 ntBASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Gm18716-201ENSMUST00000204507 1603 ntBASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Gm43092-201ENSMUST00000202986 1854 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Gm18432-201ENSMUST00000195568 1451 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Gm7919-201ENSMUST00000202043 1389 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Gm11290-204ENSMUST00000224688 3042 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Gm13788-201ENSMUST00000120767 601 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Gm12267-201ENSMUST00000121609 761 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Gm18604-201ENSMUST00000172535 558 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Gm7745-201ENSMUST00000182235 973 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Gm27640-201ENSMUST00000184580 147 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Gm17946-201ENSMUST00000186856 538 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Gm6510-201ENSMUST00000195916 574 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Gm43026-201ENSMUST00000202972 325 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Gm44604-201ENSMUST00000205475 496 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Gm45474-201ENSMUST00000209471 408 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Gm45870-201ENSMUST00000211269 601 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Gm45850-201ENSMUST00000212536 338 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Gm19181-201ENSMUST00000218891 940 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Gm7045-201ENSMUST00000221466 605 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC6.49□□□□□ -1.37
Trim11Q99PQ2 AC156576.2-202ENSMUST00000222525 411 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 AC164426.1-201ENSMUST00000225745 929 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 AC164618.1-201ENSMUST00000225769 592 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 AC122448.1-201ENSMUST00000226317 772 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 AC122393.2-201ENSMUST00000226404 1093 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 AC131029.2-201ENSMUST00000226696 628 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim11Q99PQ2 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Gm42967-201ENSMUST00000198647 2312 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Gm37137-201ENSMUST00000195138 2684 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Gm43169-201ENSMUST00000199544 4734 ntBASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Trim11Q99PQ2 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms