Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim47Q8C0E3 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Gm44697-201ENSMUST00000207756 1679 ntBASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Gm42680-201ENSMUST00000196238 2500 ntBASIC6.72□□□□□ -1.33
Trim47Q8C0E3 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Gm13064-201ENSMUST00000119125 557 ntBASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Gm14842-201ENSMUST00000119577 269 ntBASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Gm14736-201ENSMUST00000121470 336 ntBASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Gm12815-201ENSMUST00000121737 135 ntBASIC6.72□□□□□ -1.33
Trim47Q8C0E3 n-R5s19-201ENSMUST00000122793 120 ntBASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Gm25962-201ENSMUST00000157173 168 ntBASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Gm22819-201ENSMUST00000157445 303 ntBASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Gm22599-201ENSMUST00000157597 132 ntBASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Gm24857-201ENSMUST00000158061 310 ntBASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Gm23050-201ENSMUST00000158775 165 ntBASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Gm26057-201ENSMUST00000178099 165 ntBASIC6.72□□□□□ -1.33
Trim47Q8C0E3 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Gm27158-201ENSMUST00000183813 238 ntBASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Mir7674-201ENSMUST00000184964 63 ntBASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Gm28390-201ENSMUST00000185212 700 ntBASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Gm6693-201ENSMUST00000189583 813 ntBASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Gm2979-201ENSMUST00000193442 463 ntBASIC6.72□□□□□ -1.33
Trim47Q8C0E3 AC157822.1-201ENSMUST00000196643 80 ntBASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Gm43070-201ENSMUST00000196938 415 ntBASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Gm43405-201ENSMUST00000198642 337 ntBASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Gm45409-201ENSMUST00000211486 252 ntBASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Gm18703-201ENSMUST00000215318 333 ntBASIC6.72□□□□□ -1.33
Trim47Q8C0E3 AC154598.1-201ENSMUST00000227079 347 ntBASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Gm24200-201ENSMUST00000082955 157 ntBASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Gm8700-201ENSMUST00000222187 3054 ntBASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Trim47Q8C0E3 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Trim47Q8C0E3 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
Trim47Q8C0E3 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Trim47Q8C0E3 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Trim47Q8C0E3 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Trim47Q8C0E3 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
Trim47Q8C0E3 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Trim47Q8C0E3 Gm4073-201ENSMUST00000176792 3500 ntBASIC6.71□□□□□ -1.33
Trim47Q8C0E3 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Trim47Q8C0E3 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC6.71□□□□□ -1.33
Trim47Q8C0E3 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.71□□□□□ -1.33
Trim47Q8C0E3 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC6.71□□□□□ -1.33
Trim47Q8C0E3 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Trim47Q8C0E3 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Gm11885-201ENSMUST00000118473 1428 ntBASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Gm14790-201ENSMUST00000117760 1293 ntBASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Mup-ps21-201ENSMUST00000119998 448 ntBASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Gm13338-201ENSMUST00000120235 361 ntBASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC6.71□□□□□ -1.34
Trim47Q8C0E3 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Gm11507-201ENSMUST00000156462 412 ntBASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Gm23954-201ENSMUST00000157213 353 ntBASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Gm25425-201ENSMUST00000157611 96 ntBASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Gm25706-201ENSMUST00000157828 247 ntBASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Gm24395-201ENSMUST00000158139 125 ntBASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Gm7713-201ENSMUST00000181201 1007 ntBASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Gm26950-201ENSMUST00000182734 498 ntBASIC6.71□□□□□ -1.34
Trim47Q8C0E3 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Gm22897-202ENSMUST00000197782 127 ntBASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Gm32158-201ENSMUST00000200135 404 ntBASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Gm19196-201ENSMUST00000209258 357 ntBASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Gm3785-201ENSMUST00000221000 202 ntBASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Gm4263-202ENSMUST00000221392 667 ntBASIC6.71□□□□□ -1.34
Trim47Q8C0E3 CT010454.1-201ENSMUST00000225975 265 ntBASIC6.71□□□□□ -1.34
Trim47Q8C0E3 AC161758.1-201ENSMUST00000226123 310 ntBASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Gm5229-201ENSMUST00000039375 354 ntBASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Gm22126-201ENSMUST00000083244 142 ntBASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Trim47Q8C0E3 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.71□□□□□ -1.34
Trim47Q8C0E3 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim47Q8C0E3 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 107.7 ms