Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 AC069561.3-201ENSMUST00000217321 114 ntBASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm18405-201ENSMUST00000220743 511 ntBASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm6171-201ENSMUST00000220760 645 ntBASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 AC122393.2-201ENSMUST00000226404 1093 ntBASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm10356-201ENSMUST00000097152 1258 ntBASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm5832-201ENSMUST00000121704 1582 ntBASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 Gm18186-201ENSMUST00000192239 1580 ntBASIC5.89□□□□□ -1.47
Sh3rf1Q69ZI1 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 AL591843.1-201ENSMUST00000223686 3082 ntBASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Gm7927-201ENSMUST00000118818 880 ntBASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Gm11344-201ENSMUST00000122011 335 ntBASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Gm5401-201ENSMUST00000122444 365 ntBASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Gm25335-201ENSMUST00000158043 103 ntBASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Gm25013-201ENSMUST00000158402 128 ntBASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Gm24550-201ENSMUST00000158648 279 ntBASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Gm16269-201ENSMUST00000160532 409 ntBASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Trbv10-201ENSMUST00000168322 289 ntBASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Gm20519-201ENSMUST00000173684 359 ntBASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Gm22951-201ENSMUST00000179471 107 ntBASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Gm37616-201ENSMUST00000193974 322 ntBASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Gm42776-201ENSMUST00000198031 406 ntBASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Mir6906-201ENSMUST00000198998 58 ntBASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Gm43039-201ENSMUST00000202883 963 ntBASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Gm43945-201ENSMUST00000203595 754 ntBASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 AC124433.2-201ENSMUST00000223867 291 ntBASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 AC115878.1-201ENSMUST00000227247 334 ntBASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Gm8412-201ENSMUST00000077493 440 ntBASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 n-R5s37-201ENSMUST00000082533 118 ntBASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Snora44-201ENSMUST00000082670 129 ntBASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Gm45577-201ENSMUST00000210206 2287 ntBASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Gm15011-201ENSMUST00000117724 1480 ntBASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Gm43490-201ENSMUST00000197593 2652 ntBASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Sh3rf1Q69ZI1 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Gm26984-201ENSMUST00000182345 3510 ntBASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Gm20486-201ENSMUST00000101544 128 ntBASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Gm23294-201ENSMUST00000104150 164 ntBASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Gm25345-201ENSMUST00000104505 133 ntBASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Gm14385-201ENSMUST00000116315 876 ntBASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Gm15801-201ENSMUST00000120920 522 ntBASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Gm11438-201ENSMUST00000121582 189 ntBASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Gm22236-201ENSMUST00000157093 106 ntBASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Gm22216-201ENSMUST00000157557 114 ntBASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Gm8783-201ENSMUST00000159764 522 ntBASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Gm16101-201ENSMUST00000160695 430 ntBASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Gm9071-201ENSMUST00000165915 474 ntBASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Mir6541-201ENSMUST00000183649 110 ntBASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sh3rf1Q69ZI1 Gm37609-201ENSMUST00000191778 678 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms