Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 AC079644.1-201ENSMUST00000220586 405 ntBASIC5.64□□□□□ -1.51
Sox9Q04887 AC156559.1-201ENSMUST00000224158 222 ntBASIC5.64□□□□□ -1.51
Sox9Q04887 AC154576.2-203ENSMUST00000224736 253 ntBASIC5.64□□□□□ -1.51
Sox9Q04887 AC154467.1-201ENSMUST00000227527 449 ntBASIC5.64□□□□□ -1.51
Sox9Q04887 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Sox9Q04887 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
Sox9Q04887 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Sox9Q04887 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
Sox9Q04887 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sox9Q04887 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Sox9Q04887 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sox9Q04887 Fam35a-206ENSMUST00000228626 3100 ntBASIC5.64□□□□□ -1.51
Sox9Q04887 Gm43092-201ENSMUST00000202986 1854 ntBASIC5.64□□□□□ -1.51
Sox9Q04887 Naip3-201ENSMUST00000118082 4208 ntBASIC5.64□□□□□ -1.51
Sox9Q04887 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sox9Q04887 AC154755.2-201ENSMUST00000224384 2857 ntBASIC5.64□□□□□ -1.51
Sox9Q04887 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sox9Q04887 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Sox9Q04887 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.64□□□□□ -1.51
Sox9Q04887 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Sox9Q04887 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sox9Q04887 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox9Q04887 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Sox9Q04887 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox9Q04887 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox9Q04887 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Sox9Q04887 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox9Q04887 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
Sox9Q04887 Gm45633-201ENSMUST00000210669 3253 ntBASIC5.63□□□□□ -1.51
Sox9Q04887 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Sox9Q04887 Gm37504-201ENSMUST00000192537 2374 ntBASIC5.63□□□□□ -1.51
Sox9Q04887 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Sox9Q04887 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox9Q04887 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox9Q04887 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sox9Q04887 Gm24170-201ENSMUST00000104124 133 ntBASIC5.63□□□□□ -1.51
Sox9Q04887 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox9Q04887 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Sox9Q04887 Mir669d-2-201ENSMUST00000116854 86 ntBASIC5.63□□□□□ -1.51
Sox9Q04887 Gm12358-201ENSMUST00000121842 520 ntBASIC5.63□□□□□ -1.51
Sox9Q04887 Gm8214-201ENSMUST00000172123 351 ntBASIC5.63□□□□□ -1.51
Sox9Q04887 Gm22367-201ENSMUST00000178930 132 ntBASIC5.63□□□□□ -1.51
Sox9Q04887 Gm4854-201ENSMUST00000185902 574 ntBASIC5.63□□□□□ -1.51
Sox9Q04887 Gm29545-201ENSMUST00000188878 694 ntBASIC5.63□□□□□ -1.51
Sox9Q04887 Gm20885-201ENSMUST00000190192 654 ntBASIC5.63□□□□□ -1.51
Sox9Q04887 Ighv3-2-201ENSMUST00000191842 349 ntBASIC5.63□□□□□ -1.51
Sox9Q04887 Gm17953-201ENSMUST00000192061 667 ntBASIC5.63□□□□□ -1.51
Sox9Q04887 Gm29740-201ENSMUST00000193182 655 ntBASIC5.63□□□□□ -1.51
Sox9Q04887 Gm36866-201ENSMUST00000193343 657 ntBASIC5.63□□□□□ -1.51
Sox9Q04887 Gm36047-201ENSMUST00000193659 657 ntBASIC5.63□□□□□ -1.51
Sox9Q04887 Gm20857-201ENSMUST00000194766 657 ntBASIC5.63□□□□□ -1.51
Sox9Q04887 Gm20858-201ENSMUST00000195459 657 ntBASIC5.63□□□□□ -1.51
Sox9Q04887 Ighv1-68-201ENSMUST00000198789 294 ntBASIC5.63□□□□□ -1.51
Sox9Q04887 Gm31230-201ENSMUST00000199725 785 ntBASIC5.63□□□□□ -1.51
Sox9Q04887 Gm19232-201ENSMUST00000211621 652 ntBASIC5.63□□□□□ -1.51
Sox9Q04887 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC5.63□□□□□ -1.51
Sox9Q04887 AC153553.1-201ENSMUST00000218257 684 ntBASIC5.63□□□□□ -1.51
Sox9Q04887 AC109180.1-201ENSMUST00000218676 398 ntBASIC5.63□□□□□ -1.51
Sox9Q04887 Olfr790-204ENSMUST00000218901 1070 ntBASIC5.63□□□□□ -1.51
Sox9Q04887 AC152951.1-201ENSMUST00000218907 266 ntBASIC5.63□□□□□ -1.51
Sox9Q04887 AC158803.3-201ENSMUST00000220024 211 ntBASIC5.63□□□□□ -1.51
Sox9Q04887 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC5.63□□□□□ -1.51
Sox9Q04887 AC117202.1-201ENSMUST00000227007 445 ntBASIC5.63□□□□□ -1.51
Sox9Q04887 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox9Q04887 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sox9Q04887 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sox9Q04887 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sox9Q04887 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Sox9Q04887 Gm23796-201ENSMUST00000084011 160 ntBASIC5.63□□□□□ -1.51
Sox9Q04887 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
Sox9Q04887 Fus-202ENSMUST00000079045 2623 ntBASIC5.63□□□□□ -1.51
Sox9Q04887 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox9Q04887 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Sox9Q04887 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox9Q04887 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox9Q04887 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC5.63□□□□□ -1.51
Sox9Q04887 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox9Q04887 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.63□□□□□ -1.51
Sox9Q04887 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Sox9Q04887 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox9Q04887 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox9Q04887 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
Sox9Q04887 Gm37769-201ENSMUST00000193753 2369 ntBASIC5.63□□□□□ -1.51
Sox9Q04887 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Sox9Q04887 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sox9Q04887 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox9Q04887 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox9Q04887 Gm43665-201ENSMUST00000198672 1659 ntBASIC5.63□□□□□ -1.51
Sox9Q04887 Gm9239-201ENSMUST00000186942 2557 ntBASIC5.62□□□□□ -1.51
Sox9Q04887 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.62□□□□□ -1.51
Sox9Q04887 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Sox9Q04887 Gm38307-201ENSMUST00000195630 1840 ntBASIC5.62□□□□□ -1.51
Sox9Q04887 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sox9Q04887 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sox9Q04887 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sox9Q04887 Gm38362-201ENSMUST00000192999 2064 ntBASIC5.62□□□□□ -1.51
Sox9Q04887 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sox9Q04887 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Sox9Q04887 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC5.62□□□□□ -1.51
Sox9Q04887 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms