Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2afb1S4R1E0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
H2afb1S4R1E0 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
H2afb1S4R1E0 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
H2afb1S4R1E0 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
H2afb1S4R1E0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
H2afb1S4R1E0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
H2afb1S4R1E0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
H2afb1S4R1E0 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
H2afb1S4R1E0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
H2afb1S4R1E0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
H2afb1S4R1E0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
H2afb1S4R1E0 Gm6365-201ENSMUST00000054711 744 ntBASIC15.9■□□□□ 0.14
H2afb1S4R1E0 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
H2afb1S4R1E0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
H2afb1S4R1E0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.9■□□□□ 0.14
H2afb1S4R1E0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
H2afb1S4R1E0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
H2afb1S4R1E0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
H2afb1S4R1E0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.14
H2afb1S4R1E0 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
H2afb1S4R1E0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.89■□□□□ 0.13
H2afb1S4R1E0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
H2afb1S4R1E0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
H2afb1S4R1E0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
H2afb1S4R1E0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
H2afb1S4R1E0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.89■□□□□ 0.13
H2afb1S4R1E0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
H2afb1S4R1E0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.89■□□□□ 0.13
H2afb1S4R1E0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
H2afb1S4R1E0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
H2afb1S4R1E0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
H2afb1S4R1E0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.89■□□□□ 0.13
H2afb1S4R1E0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
H2afb1S4R1E0 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
H2afb1S4R1E0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
H2afb1S4R1E0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
H2afb1S4R1E0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
H2afb1S4R1E0 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
H2afb1S4R1E0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
H2afb1S4R1E0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
H2afb1S4R1E0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
H2afb1S4R1E0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
H2afb1S4R1E0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.88■□□□□ 0.13
H2afb1S4R1E0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
H2afb1S4R1E0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
H2afb1S4R1E0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
H2afb1S4R1E0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
H2afb1S4R1E0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
H2afb1S4R1E0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
H2afb1S4R1E0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
H2afb1S4R1E0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
H2afb1S4R1E0 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
H2afb1S4R1E0 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
H2afb1S4R1E0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
H2afb1S4R1E0 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
H2afb1S4R1E0 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
H2afb1S4R1E0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.87■□□□□ 0.13
H2afb1S4R1E0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
H2afb1S4R1E0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
H2afb1S4R1E0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
H2afb1S4R1E0 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
H2afb1S4R1E0 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
H2afb1S4R1E0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
H2afb1S4R1E0 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
H2afb1S4R1E0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
H2afb1S4R1E0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
H2afb1S4R1E0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
H2afb1S4R1E0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
H2afb1S4R1E0 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.87■□□□□ 0.13
H2afb1S4R1E0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
H2afb1S4R1E0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb1S4R1E0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb1S4R1E0 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.86■□□□□ 0.13
H2afb1S4R1E0 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb1S4R1E0 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb1S4R1E0 Gm7290-201ENSMUST00000104990 617 ntBASIC15.86■□□□□ 0.13
H2afb1S4R1E0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.86■□□□□ 0.13
H2afb1S4R1E0 Gm12918-201ENSMUST00000120234 636 ntBASIC15.86■□□□□ 0.13
H2afb1S4R1E0 Gm15710-201ENSMUST00000121821 636 ntBASIC15.86■□□□□ 0.13
H2afb1S4R1E0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.86■□□□□ 0.13
H2afb1S4R1E0 Gm5075-201ENSMUST00000196916 622 ntBASIC15.86■□□□□ 0.13
H2afb1S4R1E0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.86■□□□□ 0.13
H2afb1S4R1E0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.86■□□□□ 0.13
H2afb1S4R1E0 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb1S4R1E0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb1S4R1E0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb1S4R1E0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb1S4R1E0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb1S4R1E0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb1S4R1E0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb1S4R1E0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb1S4R1E0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb1S4R1E0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb1S4R1E0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb1S4R1E0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.85■□□□□ 0.13
H2afb1S4R1E0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
H2afb1S4R1E0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
H2afb1S4R1E0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
H2afb1S4R1E0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms