Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmg20bQ9Z104 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmg20bQ9Z104 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.69■□□□□ 0.9
Hmg20bQ9Z104 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.68■□□□□ 0.9
Hmg20bQ9Z104 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.68■□□□□ 0.9
Hmg20bQ9Z104 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hmg20bQ9Z104 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hmg20bQ9Z104 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hmg20bQ9Z104 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hmg20bQ9Z104 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Hmg20bQ9Z104 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hmg20bQ9Z104 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hmg20bQ9Z104 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Hmg20bQ9Z104 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hmg20bQ9Z104 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hmg20bQ9Z104 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Hmg20bQ9Z104 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hmg20bQ9Z104 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hmg20bQ9Z104 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hmg20bQ9Z104 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hmg20bQ9Z104 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmg20bQ9Z104 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hmg20bQ9Z104 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmg20bQ9Z104 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmg20bQ9Z104 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmg20bQ9Z104 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmg20bQ9Z104 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmg20bQ9Z104 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Hmg20bQ9Z104 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmg20bQ9Z104 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hmg20bQ9Z104 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmg20bQ9Z104 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmg20bQ9Z104 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmg20bQ9Z104 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hmg20bQ9Z104 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.66■□□□□ 0.9
Hmg20bQ9Z104 Gm15378-201ENSMUST00000121894 207 ntBASIC20.66■□□□□ 0.9
Hmg20bQ9Z104 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hmg20bQ9Z104 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Hmg20bQ9Z104 Gm43183-201ENSMUST00000200632 547 ntBASIC20.66■□□□□ 0.9
Hmg20bQ9Z104 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmg20bQ9Z104 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmg20bQ9Z104 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmg20bQ9Z104 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Hmg20bQ9Z104 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmg20bQ9Z104 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.66■□□□□ 0.9
Hmg20bQ9Z104 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hmg20bQ9Z104 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmg20bQ9Z104 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmg20bQ9Z104 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmg20bQ9Z104 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmg20bQ9Z104 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hmg20bQ9Z104 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.65■□□□□ 0.9
Hmg20bQ9Z104 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmg20bQ9Z104 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmg20bQ9Z104 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmg20bQ9Z104 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmg20bQ9Z104 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmg20bQ9Z104 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hmg20bQ9Z104 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
Hmg20bQ9Z104 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hmg20bQ9Z104 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Hmg20bQ9Z104 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.64■□□□□ 0.9
Hmg20bQ9Z104 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.9
Hmg20bQ9Z104 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hmg20bQ9Z104 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hmg20bQ9Z104 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.64■□□□□ 0.89
Hmg20bQ9Z104 Gm10698-201ENSMUST00000182663 604 ntBASIC20.64■□□□□ 0.89
Hmg20bQ9Z104 Gm4974-201ENSMUST00000209974 875 ntBASIC20.64■□□□□ 0.89
Hmg20bQ9Z104 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.64■□□□□ 0.89
Hmg20bQ9Z104 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Hmg20bQ9Z104 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hmg20bQ9Z104 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Hmg20bQ9Z104 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Hmg20bQ9Z104 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hmg20bQ9Z104 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hmg20bQ9Z104 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.64■□□□□ 0.89
Hmg20bQ9Z104 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hmg20bQ9Z104 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hmg20bQ9Z104 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Hmg20bQ9Z104 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmg20bQ9Z104 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmg20bQ9Z104 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmg20bQ9Z104 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmg20bQ9Z104 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmg20bQ9Z104 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmg20bQ9Z104 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Hmg20bQ9Z104 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmg20bQ9Z104 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.63■□□□□ 0.89
Hmg20bQ9Z104 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Hmg20bQ9Z104 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmg20bQ9Z104 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.63■□□□□ 0.89
Hmg20bQ9Z104 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Hmg20bQ9Z104 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hmg20bQ9Z104 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hmg20bQ9Z104 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hmg20bQ9Z104 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.62■□□□□ 0.89
Hmg20bQ9Z104 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Hmg20bQ9Z104 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hmg20bQ9Z104 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.62■□□□□ 0.89
Hmg20bQ9Z104 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms