Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ClcnkaQ9WUB7 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ClcnkaQ9WUB7 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ClcnkaQ9WUB7 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ClcnkaQ9WUB7 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ClcnkaQ9WUB7 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ClcnkaQ9WUB7 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ClcnkaQ9WUB7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ClcnkaQ9WUB7 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ClcnkaQ9WUB7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ClcnkaQ9WUB7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ClcnkaQ9WUB7 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ClcnkaQ9WUB7 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ClcnkaQ9WUB7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ClcnkaQ9WUB7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ClcnkaQ9WUB7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ClcnkaQ9WUB7 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ClcnkaQ9WUB7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
ClcnkaQ9WUB7 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ClcnkaQ9WUB7 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ClcnkaQ9WUB7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.12■□□□□ 0.17
ClcnkaQ9WUB7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ClcnkaQ9WUB7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.12■□□□□ 0.17
ClcnkaQ9WUB7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ClcnkaQ9WUB7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.11■□□□□ 0.17
ClcnkaQ9WUB7 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ClcnkaQ9WUB7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ClcnkaQ9WUB7 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ClcnkaQ9WUB7 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ClcnkaQ9WUB7 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.11■□□□□ 0.17
ClcnkaQ9WUB7 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ClcnkaQ9WUB7 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.11■□□□□ 0.17
ClcnkaQ9WUB7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.11■□□□□ 0.17
ClcnkaQ9WUB7 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.11■□□□□ 0.17
ClcnkaQ9WUB7 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
ClcnkaQ9WUB7 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.11■□□□□ 0.17
ClcnkaQ9WUB7 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ClcnkaQ9WUB7 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ClcnkaQ9WUB7 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ClcnkaQ9WUB7 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
ClcnkaQ9WUB7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ClcnkaQ9WUB7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ClcnkaQ9WUB7 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ClcnkaQ9WUB7 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ClcnkaQ9WUB7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ClcnkaQ9WUB7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ClcnkaQ9WUB7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ClcnkaQ9WUB7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
ClcnkaQ9WUB7 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.1■□□□□ 0.17
ClcnkaQ9WUB7 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ClcnkaQ9WUB7 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ClcnkaQ9WUB7 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ClcnkaQ9WUB7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ClcnkaQ9WUB7 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ClcnkaQ9WUB7 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ClcnkaQ9WUB7 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.1■□□□□ 0.17
ClcnkaQ9WUB7 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ClcnkaQ9WUB7 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
ClcnkaQ9WUB7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ClcnkaQ9WUB7 Gm13158-201ENSMUST00000122007 736 ntBASIC16.1■□□□□ 0.17
ClcnkaQ9WUB7 Gm10138-203ENSMUST00000206952 366 ntBASIC16.1■□□□□ 0.17
ClcnkaQ9WUB7 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ClcnkaQ9WUB7 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.1■□□□□ 0.17
ClcnkaQ9WUB7 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ClcnkaQ9WUB7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ClcnkaQ9WUB7 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
ClcnkaQ9WUB7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ClcnkaQ9WUB7 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ClcnkaQ9WUB7 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
ClcnkaQ9WUB7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ClcnkaQ9WUB7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ClcnkaQ9WUB7 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ClcnkaQ9WUB7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ClcnkaQ9WUB7 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ClcnkaQ9WUB7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ClcnkaQ9WUB7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
ClcnkaQ9WUB7 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.09■□□□□ 0.17
ClcnkaQ9WUB7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.09■□□□□ 0.17
ClcnkaQ9WUB7 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.09■□□□□ 0.17
ClcnkaQ9WUB7 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ClcnkaQ9WUB7 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
ClcnkaQ9WUB7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ClcnkaQ9WUB7 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ClcnkaQ9WUB7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
ClcnkaQ9WUB7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ClcnkaQ9WUB7 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ClcnkaQ9WUB7 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
ClcnkaQ9WUB7 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ClcnkaQ9WUB7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
ClcnkaQ9WUB7 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ClcnkaQ9WUB7 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ClcnkaQ9WUB7 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ClcnkaQ9WUB7 Mir2861-201ENSMUST00000175539 82 ntBASIC16.08■□□□□ 0.16
ClcnkaQ9WUB7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.08■□□□□ 0.16
ClcnkaQ9WUB7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ClcnkaQ9WUB7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ClcnkaQ9WUB7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ClcnkaQ9WUB7 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ClcnkaQ9WUB7 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ClcnkaQ9WUB7 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms