Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col13a1Q9R1N9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Col13a1Q9R1N9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col13a1Q9R1N9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col13a1Q9R1N9 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.88□□□□□ -0.03
Col13a1Q9R1N9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Col13a1Q9R1N9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col13a1Q9R1N9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col13a1Q9R1N9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col13a1Q9R1N9 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.88□□□□□ -0.03
Col13a1Q9R1N9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col13a1Q9R1N9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col13a1Q9R1N9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col13a1Q9R1N9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col13a1Q9R1N9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col13a1Q9R1N9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col13a1Q9R1N9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col13a1Q9R1N9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col13a1Q9R1N9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
Col13a1Q9R1N9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Col13a1Q9R1N9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.87□□□□□ -0.03
Col13a1Q9R1N9 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.87□□□□□ -0.03
Col13a1Q9R1N9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col13a1Q9R1N9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col13a1Q9R1N9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col13a1Q9R1N9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.87□□□□□ -0.03
Col13a1Q9R1N9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col13a1Q9R1N9 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col13a1Q9R1N9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col13a1Q9R1N9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col13a1Q9R1N9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col13a1Q9R1N9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col13a1Q9R1N9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col13a1Q9R1N9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col13a1Q9R1N9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col13a1Q9R1N9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col13a1Q9R1N9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col13a1Q9R1N9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col13a1Q9R1N9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col13a1Q9R1N9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col13a1Q9R1N9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
Col13a1Q9R1N9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col13a1Q9R1N9 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.86□□□□□ -0.03
Col13a1Q9R1N9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.86□□□□□ -0.03
Col13a1Q9R1N9 Gm7153-201ENSMUST00000117092 455 ntBASIC14.86□□□□□ -0.03
Col13a1Q9R1N9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col13a1Q9R1N9 Gm17807-201ENSMUST00000186869 298 ntBASIC14.86□□□□□ -0.03
Col13a1Q9R1N9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col13a1Q9R1N9 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Col13a1Q9R1N9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Col13a1Q9R1N9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col13a1Q9R1N9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col13a1Q9R1N9 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.86□□□□□ -0.03
Col13a1Q9R1N9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col13a1Q9R1N9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Col13a1Q9R1N9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col13a1Q9R1N9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col13a1Q9R1N9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Col13a1Q9R1N9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Col13a1Q9R1N9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.85□□□□□ -0.03
Col13a1Q9R1N9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col13a1Q9R1N9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Col13a1Q9R1N9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Col13a1Q9R1N9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col13a1Q9R1N9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col13a1Q9R1N9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col13a1Q9R1N9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.85□□□□□ -0.03
Col13a1Q9R1N9 Gm38285-201ENSMUST00000192928 922 ntBASIC14.85□□□□□ -0.03
Col13a1Q9R1N9 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col13a1Q9R1N9 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.85□□□□□ -0.03
Col13a1Q9R1N9 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col13a1Q9R1N9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col13a1Q9R1N9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col13a1Q9R1N9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col13a1Q9R1N9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col13a1Q9R1N9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col13a1Q9R1N9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.84□□□□□ -0.03
Col13a1Q9R1N9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col13a1Q9R1N9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col13a1Q9R1N9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col13a1Q9R1N9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.84□□□□□ -0.03
Col13a1Q9R1N9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Col13a1Q9R1N9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col13a1Q9R1N9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.84□□□□□ -0.03
Col13a1Q9R1N9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col13a1Q9R1N9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC14.84□□□□□ -0.03
Col13a1Q9R1N9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col13a1Q9R1N9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.84□□□□□ -0.03
Col13a1Q9R1N9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col13a1Q9R1N9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.84□□□□□ -0.03
Col13a1Q9R1N9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.84□□□□□ -0.03
Col13a1Q9R1N9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.84□□□□□ -0.03
Col13a1Q9R1N9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.84□□□□□ -0.03
Col13a1Q9R1N9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col13a1Q9R1N9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col13a1Q9R1N9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col13a1Q9R1N9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col13a1Q9R1N9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col13a1Q9R1N9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col13a1Q9R1N9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms