Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a4Q9QZR9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a4Q9QZR9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.65■□□□□ 0.42
Col4a4Q9QZR9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a4Q9QZR9 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Col4a4Q9QZR9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a4Q9QZR9 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.65■□□□□ 0.42
Col4a4Q9QZR9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a4Q9QZR9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a4Q9QZR9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a4Q9QZR9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a4Q9QZR9 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.65■□□□□ 0.42
Col4a4Q9QZR9 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a4Q9QZR9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Col4a4Q9QZR9 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.64■□□□□ 0.42
Col4a4Q9QZR9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.64■□□□□ 0.42
Col4a4Q9QZR9 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Col4a4Q9QZR9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Col4a4Q9QZR9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Col4a4Q9QZR9 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a4Q9QZR9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a4Q9QZR9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Col4a4Q9QZR9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a4Q9QZR9 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.64■□□□□ 0.41
Col4a4Q9QZR9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a4Q9QZR9 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.64■□□□□ 0.41
Col4a4Q9QZR9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.64■□□□□ 0.41
Col4a4Q9QZR9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a4Q9QZR9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a4Q9QZR9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a4Q9QZR9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a4Q9QZR9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Col4a4Q9QZR9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a4Q9QZR9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Col4a4Q9QZR9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.63■□□□□ 0.41
Col4a4Q9QZR9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a4Q9QZR9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
Col4a4Q9QZR9 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.63■□□□□ 0.41
Col4a4Q9QZR9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a4Q9QZR9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a4Q9QZR9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a4Q9QZR9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a4Q9QZR9 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a4Q9QZR9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Col4a4Q9QZR9 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a4Q9QZR9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a4Q9QZR9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Col4a4Q9QZR9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a4Q9QZR9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.62■□□□□ 0.41
Col4a4Q9QZR9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a4Q9QZR9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a4Q9QZR9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.62■□□□□ 0.41
Col4a4Q9QZR9 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.62■□□□□ 0.41
Col4a4Q9QZR9 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a4Q9QZR9 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a4Q9QZR9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Col4a4Q9QZR9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a4Q9QZR9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a4Q9QZR9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a4Q9QZR9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Col4a4Q9QZR9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a4Q9QZR9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a4Q9QZR9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.61■□□□□ 0.41
Col4a4Q9QZR9 Gm12350-201ENSMUST00000121208 462 ntBASIC17.61■□□□□ 0.41
Col4a4Q9QZR9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.61■□□□□ 0.41
Col4a4Q9QZR9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.61■□□□□ 0.41
Col4a4Q9QZR9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a4Q9QZR9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Col4a4Q9QZR9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a4Q9QZR9 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.61■□□□□ 0.41
Col4a4Q9QZR9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Col4a4Q9QZR9 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.61■□□□□ 0.41
Col4a4Q9QZR9 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a4Q9QZR9 Gm5364-201ENSMUST00000216789 889 ntBASIC17.61■□□□□ 0.41
Col4a4Q9QZR9 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a4Q9QZR9 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a4Q9QZR9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Col4a4Q9QZR9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a4Q9QZR9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Col4a4Q9QZR9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Col4a4Q9QZR9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.6■□□□□ 0.41
Col4a4Q9QZR9 Gm2213-201ENSMUST00000197485 688 ntBASIC17.6■□□□□ 0.41
Col4a4Q9QZR9 Gm10060-201ENSMUST00000212002 111 ntBASIC17.6■□□□□ 0.41
Col4a4Q9QZR9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a4Q9QZR9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a4Q9QZR9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a4Q9QZR9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.6■□□□□ 0.41
Col4a4Q9QZR9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.6■□□□□ 0.41
Col4a4Q9QZR9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a4Q9QZR9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a4Q9QZR9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a4Q9QZR9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a4Q9QZR9 Gm11336-201ENSMUST00000118168 334 ntBASIC17.59■□□□□ 0.41
Col4a4Q9QZR9 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Col4a4Q9QZR9 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a4Q9QZR9 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.59■□□□□ 0.41
Col4a4Q9QZR9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a4Q9QZR9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a4Q9QZR9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Col4a4Q9QZR9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms