Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn5aQ9JJV9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Scn5aQ9JJV9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scn5aQ9JJV9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn5aQ9JJV9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn5aQ9JJV9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn5aQ9JJV9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.15■□□□□ 0.5
Scn5aQ9JJV9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Scn5aQ9JJV9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Scn5aQ9JJV9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn5aQ9JJV9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn5aQ9JJV9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn5aQ9JJV9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.14■□□□□ 0.49
Scn5aQ9JJV9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Scn5aQ9JJV9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.14■□□□□ 0.49
Scn5aQ9JJV9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Scn5aQ9JJV9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scn5aQ9JJV9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn5aQ9JJV9 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn5aQ9JJV9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn5aQ9JJV9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn5aQ9JJV9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn5aQ9JJV9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scn5aQ9JJV9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn5aQ9JJV9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scn5aQ9JJV9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.13■□□□□ 0.49
Scn5aQ9JJV9 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.13■□□□□ 0.49
Scn5aQ9JJV9 Gm27357-201ENSMUST00000183754 135 ntBASIC18.13■□□□□ 0.49
Scn5aQ9JJV9 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn5aQ9JJV9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Scn5aQ9JJV9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn5aQ9JJV9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn5aQ9JJV9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Scn5aQ9JJV9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn5aQ9JJV9 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn5aQ9JJV9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn5aQ9JJV9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn5aQ9JJV9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn5aQ9JJV9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn5aQ9JJV9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn5aQ9JJV9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn5aQ9JJV9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
Scn5aQ9JJV9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scn5aQ9JJV9 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scn5aQ9JJV9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scn5aQ9JJV9 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.11■□□□□ 0.49
Scn5aQ9JJV9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.11■□□□□ 0.49
Scn5aQ9JJV9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.11■□□□□ 0.49
Scn5aQ9JJV9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn5aQ9JJV9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn5aQ9JJV9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Scn5aQ9JJV9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn5aQ9JJV9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Scn5aQ9JJV9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
Scn5aQ9JJV9 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Scn5aQ9JJV9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn5aQ9JJV9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scn5aQ9JJV9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn5aQ9JJV9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn5aQ9JJV9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.1■□□□□ 0.49
Scn5aQ9JJV9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scn5aQ9JJV9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.1■□□□□ 0.49
Scn5aQ9JJV9 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.1■□□□□ 0.49
Scn5aQ9JJV9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn5aQ9JJV9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn5aQ9JJV9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scn5aQ9JJV9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Scn5aQ9JJV9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn5aQ9JJV9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scn5aQ9JJV9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.1■□□□□ 0.49
Scn5aQ9JJV9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn5aQ9JJV9 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn5aQ9JJV9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn5aQ9JJV9 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.09■□□□□ 0.49
Scn5aQ9JJV9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn5aQ9JJV9 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn5aQ9JJV9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn5aQ9JJV9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn5aQ9JJV9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scn5aQ9JJV9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.09■□□□□ 0.49
Scn5aQ9JJV9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn5aQ9JJV9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.08■□□□□ 0.49
Scn5aQ9JJV9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scn5aQ9JJV9 Gm26039-201ENSMUST00000158152 144 ntBASIC18.08■□□□□ 0.49
Scn5aQ9JJV9 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scn5aQ9JJV9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scn5aQ9JJV9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Scn5aQ9JJV9 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scn5aQ9JJV9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Scn5aQ9JJV9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Scn5aQ9JJV9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Scn5aQ9JJV9 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.08■□□□□ 0.48
Scn5aQ9JJV9 Olfr129-201ENSMUST00000122318 993 ntBASIC18.08■□□□□ 0.48
Scn5aQ9JJV9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.08■□□□□ 0.48
Scn5aQ9JJV9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Scn5aQ9JJV9 Grk6-206ENSMUST00000224995 2971 ntBASIC18.07■□□□□ 0.48
Scn5aQ9JJV9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Scn5aQ9JJV9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn5aQ9JJV9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn5aQ9JJV9 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms