Protein–RNA interactions for Protein: Q9JJ80

Rpf2, Ribosome production factor 2 homolog, mousemouse

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf2Q9JJ80 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpf2Q9JJ80 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Rpf2Q9JJ80 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpf2Q9JJ80 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpf2Q9JJ80 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rpf2Q9JJ80 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpf2Q9JJ80 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpf2Q9JJ80 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpf2Q9JJ80 Gm10418-201ENSMUST00000100943 576 ntBASIC18.65■□□□□ 0.58
Rpf2Q9JJ80 Gm2399-201ENSMUST00000104944 225 ntBASIC18.65■□□□□ 0.58
Rpf2Q9JJ80 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rpf2Q9JJ80 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.65■□□□□ 0.58
Rpf2Q9JJ80 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rpf2Q9JJ80 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpf2Q9JJ80 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpf2Q9JJ80 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpf2Q9JJ80 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpf2Q9JJ80 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpf2Q9JJ80 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpf2Q9JJ80 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rpf2Q9JJ80 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpf2Q9JJ80 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rpf2Q9JJ80 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Rpf2Q9JJ80 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Rpf2Q9JJ80 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpf2Q9JJ80 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpf2Q9JJ80 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Rpf2Q9JJ80 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.64■□□□□ 0.57
Rpf2Q9JJ80 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpf2Q9JJ80 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpf2Q9JJ80 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.64■□□□□ 0.57
Rpf2Q9JJ80 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rpf2Q9JJ80 Gm42642-201ENSMUST00000200683 355 ntBASIC18.64■□□□□ 0.57
Rpf2Q9JJ80 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rpf2Q9JJ80 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpf2Q9JJ80 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpf2Q9JJ80 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpf2Q9JJ80 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpf2Q9JJ80 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpf2Q9JJ80 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rpf2Q9JJ80 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpf2Q9JJ80 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpf2Q9JJ80 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpf2Q9JJ80 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpf2Q9JJ80 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpf2Q9JJ80 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpf2Q9JJ80 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Rpf2Q9JJ80 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpf2Q9JJ80 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.63■□□□□ 0.57
Rpf2Q9JJ80 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.63■□□□□ 0.57
Rpf2Q9JJ80 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.63■□□□□ 0.57
Rpf2Q9JJ80 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpf2Q9JJ80 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpf2Q9JJ80 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rpf2Q9JJ80 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpf2Q9JJ80 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpf2Q9JJ80 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpf2Q9JJ80 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Rpf2Q9JJ80 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.63■□□□□ 0.57
Rpf2Q9JJ80 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpf2Q9JJ80 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.62■□□□□ 0.57
Rpf2Q9JJ80 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpf2Q9JJ80 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpf2Q9JJ80 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Rpf2Q9JJ80 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpf2Q9JJ80 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.62■□□□□ 0.57
Rpf2Q9JJ80 AV356131-201ENSMUST00000206201 750 ntBASIC18.62■□□□□ 0.57
Rpf2Q9JJ80 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
Rpf2Q9JJ80 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.62■□□□□ 0.57
Rpf2Q9JJ80 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpf2Q9JJ80 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rpf2Q9JJ80 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rpf2Q9JJ80 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpf2Q9JJ80 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Rpf2Q9JJ80 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpf2Q9JJ80 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpf2Q9JJ80 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpf2Q9JJ80 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpf2Q9JJ80 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.61■□□□□ 0.57
Rpf2Q9JJ80 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpf2Q9JJ80 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpf2Q9JJ80 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpf2Q9JJ80 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpf2Q9JJ80 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Rpf2Q9JJ80 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpf2Q9JJ80 Mir2861-201ENSMUST00000175539 82 ntBASIC18.61■□□□□ 0.57
Rpf2Q9JJ80 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpf2Q9JJ80 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpf2Q9JJ80 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpf2Q9JJ80 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpf2Q9JJ80 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpf2Q9JJ80 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpf2Q9JJ80 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpf2Q9JJ80 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rpf2Q9JJ80 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpf2Q9JJ80 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpf2Q9JJ80 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpf2Q9JJ80 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpf2Q9JJ80 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpf2Q9JJ80 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms