Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.12■□□□□ 0.49
Nop56Q9D6Z1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nop56Q9D6Z1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Nop56Q9D6Z1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nop56Q9D6Z1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nop56Q9D6Z1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nop56Q9D6Z1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nop56Q9D6Z1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Nop56Q9D6Z1 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.11■□□□□ 0.49
Nop56Q9D6Z1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nop56Q9D6Z1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nop56Q9D6Z1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nop56Q9D6Z1 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Nop56Q9D6Z1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.11■□□□□ 0.49
Nop56Q9D6Z1 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nop56Q9D6Z1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nop56Q9D6Z1 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.11■□□□□ 0.49
Nop56Q9D6Z1 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nop56Q9D6Z1 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nop56Q9D6Z1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Nop56Q9D6Z1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nop56Q9D6Z1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nop56Q9D6Z1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nop56Q9D6Z1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.1■□□□□ 0.49
Nop56Q9D6Z1 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nop56Q9D6Z1 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nop56Q9D6Z1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nop56Q9D6Z1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nop56Q9D6Z1 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.1■□□□□ 0.49
Nop56Q9D6Z1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nop56Q9D6Z1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Nop56Q9D6Z1 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nop56Q9D6Z1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nop56Q9D6Z1 Gm22325-201ENSMUST00000158904 308 ntBASIC18.1■□□□□ 0.49
Nop56Q9D6Z1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.1■□□□□ 0.49
Nop56Q9D6Z1 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nop56Q9D6Z1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nop56Q9D6Z1 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nop56Q9D6Z1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nop56Q9D6Z1 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Nop56Q9D6Z1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nop56Q9D6Z1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nop56Q9D6Z1 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nop56Q9D6Z1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nop56Q9D6Z1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nop56Q9D6Z1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Nop56Q9D6Z1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nop56Q9D6Z1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nop56Q9D6Z1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Nop56Q9D6Z1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Nop56Q9D6Z1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.09■□□□□ 0.49
Nop56Q9D6Z1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nop56Q9D6Z1 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nop56Q9D6Z1 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nop56Q9D6Z1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nop56Q9D6Z1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nop56Q9D6Z1 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nop56Q9D6Z1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Nop56Q9D6Z1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nop56Q9D6Z1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Nop56Q9D6Z1 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Nop56Q9D6Z1 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nop56Q9D6Z1 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nop56Q9D6Z1 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Nop56Q9D6Z1 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Nop56Q9D6Z1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Nop56Q9D6Z1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Nop56Q9D6Z1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nop56Q9D6Z1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Nop56Q9D6Z1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nop56Q9D6Z1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Nop56Q9D6Z1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
Nop56Q9D6Z1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Nop56Q9D6Z1 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nop56Q9D6Z1 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nop56Q9D6Z1 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nop56Q9D6Z1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nop56Q9D6Z1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nop56Q9D6Z1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nop56Q9D6Z1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nop56Q9D6Z1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nop56Q9D6Z1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nop56Q9D6Z1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.07■□□□□ 0.48
Nop56Q9D6Z1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nop56Q9D6Z1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Nop56Q9D6Z1 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nop56Q9D6Z1 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.07■□□□□ 0.48
Nop56Q9D6Z1 Idnk-204ENSMUST00000226010 1898 ntBASIC18.07■□□□□ 0.48
Nop56Q9D6Z1 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nop56Q9D6Z1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nop56Q9D6Z1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nop56Q9D6Z1 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nop56Q9D6Z1 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nop56Q9D6Z1 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nop56Q9D6Z1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nop56Q9D6Z1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nop56Q9D6Z1 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nop56Q9D6Z1 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Nop56Q9D6Z1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nop56Q9D6Z1 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms