Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rita1Q9D1H0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rita1Q9D1H0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Rita1Q9D1H0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rita1Q9D1H0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Rita1Q9D1H0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rita1Q9D1H0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.15■□□□□ 0.18
Rita1Q9D1H0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rita1Q9D1H0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Rita1Q9D1H0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rita1Q9D1H0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rita1Q9D1H0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rita1Q9D1H0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rita1Q9D1H0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rita1Q9D1H0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rita1Q9D1H0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rita1Q9D1H0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rita1Q9D1H0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rita1Q9D1H0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rita1Q9D1H0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rita1Q9D1H0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rita1Q9D1H0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.14■□□□□ 0.17
Rita1Q9D1H0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.14■□□□□ 0.17
Rita1Q9D1H0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rita1Q9D1H0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.14■□□□□ 0.17
Rita1Q9D1H0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rita1Q9D1H0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rita1Q9D1H0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Rita1Q9D1H0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rita1Q9D1H0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rita1Q9D1H0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rita1Q9D1H0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.14■□□□□ 0.17
Rita1Q9D1H0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rita1Q9D1H0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rita1Q9D1H0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rita1Q9D1H0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rita1Q9D1H0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.13■□□□□ 0.17
Rita1Q9D1H0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rita1Q9D1H0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rita1Q9D1H0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Rita1Q9D1H0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.13■□□□□ 0.17
Rita1Q9D1H0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rita1Q9D1H0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Rita1Q9D1H0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rita1Q9D1H0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rita1Q9D1H0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rita1Q9D1H0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rita1Q9D1H0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rita1Q9D1H0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rita1Q9D1H0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rita1Q9D1H0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.12■□□□□ 0.17
Rita1Q9D1H0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rita1Q9D1H0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rita1Q9D1H0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Rita1Q9D1H0 Gm13559-201ENSMUST00000120476 863 ntBASIC16.12■□□□□ 0.17
Rita1Q9D1H0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rita1Q9D1H0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rita1Q9D1H0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rita1Q9D1H0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.12■□□□□ 0.17
Rita1Q9D1H0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rita1Q9D1H0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rita1Q9D1H0 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rita1Q9D1H0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rita1Q9D1H0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rita1Q9D1H0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rita1Q9D1H0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Rita1Q9D1H0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rita1Q9D1H0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rita1Q9D1H0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.11■□□□□ 0.17
Rita1Q9D1H0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rita1Q9D1H0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rita1Q9D1H0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rita1Q9D1H0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rita1Q9D1H0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.11■□□□□ 0.17
Rita1Q9D1H0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rita1Q9D1H0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Rita1Q9D1H0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rita1Q9D1H0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rita1Q9D1H0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rita1Q9D1H0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rita1Q9D1H0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rita1Q9D1H0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rita1Q9D1H0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rita1Q9D1H0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rita1Q9D1H0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rita1Q9D1H0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rita1Q9D1H0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rita1Q9D1H0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rita1Q9D1H0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rita1Q9D1H0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rita1Q9D1H0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rita1Q9D1H0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.1■□□□□ 0.17
Rita1Q9D1H0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rita1Q9D1H0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.1■□□□□ 0.17
Rita1Q9D1H0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Rita1Q9D1H0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.1■□□□□ 0.17
Rita1Q9D1H0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rita1Q9D1H0 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.1■□□□□ 0.17
Rita1Q9D1H0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rita1Q9D1H0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms