Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Upk1aQ9D132 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Upk1aQ9D132 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Upk1aQ9D132 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Upk1aQ9D132 Gm7514-201ENSMUST00000209475 934 ntBASIC16.62■□□□□ 0.25
Upk1aQ9D132 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Upk1aQ9D132 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Upk1aQ9D132 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Upk1aQ9D132 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Upk1aQ9D132 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Upk1aQ9D132 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Upk1aQ9D132 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upk1aQ9D132 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Upk1aQ9D132 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Upk1aQ9D132 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Upk1aQ9D132 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upk1aQ9D132 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upk1aQ9D132 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Upk1aQ9D132 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Upk1aQ9D132 Gm29791-202ENSMUST00000207888 369 ntBASIC16.61■□□□□ 0.25
Upk1aQ9D132 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Upk1aQ9D132 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upk1aQ9D132 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upk1aQ9D132 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upk1aQ9D132 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upk1aQ9D132 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Upk1aQ9D132 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upk1aQ9D132 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Upk1aQ9D132 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Upk1aQ9D132 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upk1aQ9D132 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Upk1aQ9D132 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Upk1aQ9D132 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Upk1aQ9D132 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Upk1aQ9D132 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Upk1aQ9D132 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Upk1aQ9D132 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Upk1aQ9D132 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.6■□□□□ 0.25
Upk1aQ9D132 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.6■□□□□ 0.25
Upk1aQ9D132 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Upk1aQ9D132 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Upk1aQ9D132 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Upk1aQ9D132 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Upk1aQ9D132 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Upk1aQ9D132 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Upk1aQ9D132 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Upk1aQ9D132 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Upk1aQ9D132 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Upk1aQ9D132 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Upk1aQ9D132 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Upk1aQ9D132 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Upk1aQ9D132 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Upk1aQ9D132 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Upk1aQ9D132 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.59■□□□□ 0.25
Upk1aQ9D132 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.59■□□□□ 0.25
Upk1aQ9D132 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.59■□□□□ 0.25
Upk1aQ9D132 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.59■□□□□ 0.25
Upk1aQ9D132 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Upk1aQ9D132 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.59■□□□□ 0.25
Upk1aQ9D132 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Upk1aQ9D132 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Upk1aQ9D132 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Upk1aQ9D132 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Upk1aQ9D132 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.59■□□□□ 0.25
Upk1aQ9D132 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.59■□□□□ 0.25
Upk1aQ9D132 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Upk1aQ9D132 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Upk1aQ9D132 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Upk1aQ9D132 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
Upk1aQ9D132 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.58■□□□□ 0.25
Upk1aQ9D132 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Upk1aQ9D132 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Upk1aQ9D132 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Upk1aQ9D132 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Upk1aQ9D132 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Upk1aQ9D132 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.58■□□□□ 0.24
Upk1aQ9D132 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Upk1aQ9D132 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Upk1aQ9D132 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.58■□□□□ 0.24
Upk1aQ9D132 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Upk1aQ9D132 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Upk1aQ9D132 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Upk1aQ9D132 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Upk1aQ9D132 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Upk1aQ9D132 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Upk1aQ9D132 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Upk1aQ9D132 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Upk1aQ9D132 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Upk1aQ9D132 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.57■□□□□ 0.24
Upk1aQ9D132 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Upk1aQ9D132 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Upk1aQ9D132 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Upk1aQ9D132 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
Upk1aQ9D132 Gm42642-201ENSMUST00000200683 355 ntBASIC16.57■□□□□ 0.24
Upk1aQ9D132 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.57■□□□□ 0.24
Upk1aQ9D132 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Upk1aQ9D132 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Upk1aQ9D132 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Upk1aQ9D132 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Upk1aQ9D132 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 140.8 ms